Gene family  

Sub-families
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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (2 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM004844 has 29 genes in 23 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 29 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G13850 aly name=fgenesh2_kg.6__1376__AT5G14100.1;pid=488242;prot=eq;tid=488242 - scaffold_6 No
AT5G14100 ath member of NAP subfamily;non-intrinsic ABC protein 14 transcript=eq;prot=eq; - 5 No
BD4G19047 bdi pid=Bradi4g19047.1;tid=Bradi4g19047.1;GeneName=Bradi4g19047;transcript=eq;prot=eq + Bd4 No
CP00070G01220 cpa name=evm.TU.supercontig_70.122;pid=evm.TU.supercontig_70.122;prot=eq;transcript=eq - supercontig_70 No
CR16G08290 cre name=pasa_Sanger_mRNA14749;pid=397055;prot=eq;tid=405074;transcript=eq + chromosome_16 No
FV6G51270 fve ABC transporter I family member 11, chloroplastic (ABC transporter ABCI.11), Precursor (similar to) transcript=eq;prot=eq;pid=gene01343 + LG6 No
GM16G05870 gma 16 pid=16301624;transcript=eq;prot=eq;name=Glyma16g05870.1 - Gm16 No
GM19G26470 gma 19 pid=16312881;transcript=eq;prot=eq;name=Glyma19g26470.1 + Gm19 No
LJ0G369360 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_133099;name=LjSGA_133099.1 + LjSGA_133099 No
MD00G392520 mdo transcript=eq;prot=eq;pid=MDP0000328020;tid=MDP0000328020;contig=MDC017797.140 - MDC017797.140 Yes
MD17G000620 mdo transcript=eq;prot=eq;pid=MDP0000219021;tid=MDP0000219021;contig=MDC021610.17 - 17 No
ME03081G00140 mes PACid=17968451;RNAname=cassava4.1_013263m;GeneName=cassava4.1_013263m.g;transcript=eq;prot=eq + scaffold03081 No
MRCC299_08G02780 mrcc299 name=est_cluster_kg.Chr_08__59__3199907:1;pid=108776;prot=eq;tid=108776;transcript=eq + Chr_08 No
MT0G27770 mtr ABC transporter I family member 11, chloroplastic (AHRD V1 ***- Q8LEF6) transcript=eq;prot=eq;pid=AC233680_3.1; - AC233680.1 No
MT7G028600 mtr ABC transporter I family member 11, chloroplastic (AHRD V1 ***- Q8LEF6); contains Interpro domain(s) IPR003439 ABC transporter-like transcript=eq;prot=eq;pid=Medtr7g028600.1; - 7 No
OL03G00490 olu NULL name=gwEuk.3.478.1,pid=6452,prot=eq,tid=6452 + Chr_3 No
OS11G29850 osa ABC transporter, ATP%2Dbinding protein, putative, expressed transcript=eq;prot=eq; + 11 No
OS11G29860 osa hypothetical protein transcript=eq;prot=eq; + 11 Yes
OSINDICA_11G21050 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC035207; + Chr11 No
OSINDICA_11G21070 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC035208; + Chr11 No
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