Gene family  

Sub-families
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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM004789 has 30 genes in 25 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 30 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G29420 aly name=Al_scaffold_0002_2757;pid=878163;prot=eq;tid=909676 - scaffold_2 No
AT1G80380 ath encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle.;P-loop containing nucleoside triphosphate hydrolases superfamily protein transcript=eq;prot=eq; + 1 No
BD2G46690 bdi ATP binding (Blast2GO) pid=Bradi2g46690.1;tid=Bradi2g46690.1;GeneName=Bradi2g46690;transcript=eq;prot=eq + Bd2 No
CP00010G01590 cpa name=evm.TU.supercontig_10.159;pid=evm.TU.supercontig_10.159;prot=eq;transcript=eq - supercontig_10 No
CR12G12210 cre name=BTM_estExt_fgenesh2_pg.C_200045;pid=196366;prot=eq;tid=196366;transcript=eq - chromosome_12 No
FV6G16780 fve D-glycerate 3-kinase, chloroplastic (AtGLYK), Precursor (similar to) transcript=eq;prot=eq;pid=gene05994 - LG6 No
GM13G43820 gma 13 pid=16293679;transcript=eq;prot=eq;name=Glyma13g43820.1 - Gm13 No
GM15G01540 gma 15 pid=16297252;transcript=eq;prot=eq;name=Glyma15g01540.1 + Gm15 No
LJ3G000660 lja partial;prot=eq;transcript=eq;scaffold=CM0253;name=chr3.CM0253.80.nd + chr3 No
LJ3G021540 lja prot=eq;transcript=eq;scaffold=CM0226;name=chr3.CM0226.220.nc - chr3 No
MD08G005550 mdo transcript=eq;prot=eq;pid=MDP0000142597;tid=MDP0000142597;contig=MDC022424.123 - 8 No
ME02196G00050 mes PACid=17982976;RNAname=cassava4.1_006274m;GeneName=cassava4.1_006274m.g;transcript=ne;prot=eq + scaffold02196 No
MRCC299_02G08030 mrcc299 name=fgenesh2_kg.C_Chr_02000007;pid=96229;prot=eq;tid=96229;transcript=eq - Chr_02 No
MT2G102510 mtr D-glycerate 3-kinase, chloroplastic (AHRD V1 **** Q944I4) transcript=eq;prot=eq;pid=Medtr2g102510.2; - 2 No
OL06G01800 olu NULL name=e_gwEuk.6.320.1,pid=41282,prot=eq,tid=41282 - Chr_6 No
OS01G48990 osa uncharacterized kinase mug58, putative, expressed transcript=eq;prot=eq; + 1 No
OSINDICA_01G46330 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC003047; + Chr01 No
OT06G02040 ota Predicted kinase (ISS); name=OT06G02040;protein_id=CAL53463.1;prot=eq - chrom06 No
PP00003G00830 ppa NULL name=e_gw1.3.131.1,pid=111900,prot=eq,tid=111900 - scaffold_3 No
PP00027G01730 ppa NULL name=fgenesh1_pg.scaffold_27000180,pid=70351,prot=eq,tid=70351 - scaffold_27 No
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