Gene family  

Sub-families
ORTHO005313 (26 genes in 25 species)
ORTHO031342 (3 genes in 1 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (4 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM004784 has 30 genes in 25 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 30 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G40330 aly name=Al_scaffold_0001_3970;pid=882203;prot=eq;tid=913716 + scaffold_1 No
AL5G29460 aly name=Al_scaffold_0005_2811;pid=867332;prot=eq;tid=898845 + scaffold_5 No
AL6G35160 aly name=Al_scaffold_0006_3399;pid=863890;prot=eq;tid=895403 - scaffold_6 No
AL7G17220 aly name=scaffold_701835.1;pid=914093;prot=eq;tid=945606 + scaffold_7 No
AT4G24930 ath thylakoid lumenal 17.9 kDa protein, chloroplast; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 48 Blast hits to 48 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).;thylakoid lumenal 17.9 kDa protein, chloroplast transcript=eq;prot=eq; - 4 No
BD1G26880 bdi pid=Bradi1g26880.1;tid=Bradi1g26880.1;GeneName=Bradi1g26880;transcript=eq;prot=eq + Bd1 No
CP00013G00920 cpa name=evm.TU.supercontig_13.92;pid=evm.TU.supercontig_13.92;prot=eq;transcript=eq + supercontig_13 No
CR17G03960 cre name=SKA_estExt_fgenesh2_pg.C_540035;pid=206051;prot=eq;tid=206056;transcript=eq + chromosome_17 No
FV0G09900 fve Thylakoid lumenal 17.9 kDa protein, chloroplastic, Precursor (putative) transcript=eq;prot=eq;pid=gene06310 + scf0513158 No
GM04G37330 gma 04 pid=16257033;transcript=eq;prot=eq;name=Glyma04g37330.1 - Gm04 No
GM06G17750 gma 06 pid=16263320;transcript=eq;prot=eq;name=Glyma06g17750.1 + Gm06 No
LJ0G022400 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_012168;name=LjSGA_012168.1 - LjSGA_012168 No
MD00G469080 mdo transcript=eq;prot=eq;pid=MDP0000221145;tid=MDP0000221145;contig=MDC021781.288 - MDC021781.288 No
MD06G012280 mdo transcript=eq;prot=eq;pid=MDP0000241363;tid=MDP0000241363;contig=MDC012241.345 + 6 No
ME10175G00010 mes PACid=17982909;RNAname=cassava4.1_015430m;GeneName=cassava4.1_015430m.g;transcript=eq;prot=eq + scaffold10175 No
MRCC299_11G05440 mrcc299 name=EuGene.1100010546;pid=62760;prot=eq;tid=62760;transcript=eq - Chr_11 No
MT3G099140 mtr Thylakoid lumenal 17.9 kDa protein, chloroplastic (AHRD V1 ***- Q9SW33) transcript=eq;prot=eq;pid=Medtr3g099140.1; + 3 No
OL09G01440 olu NULL name=eugene.0900010147,pid=33443,prot=eq,tid=33443 - Chr_9 No
OS01G01280 osa expressed protein transcript=eq;prot=eq; + 1 No
OSINDICA_01G00280 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC000018; + Chr01 No
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