Gene family  

Sub-families
ORTHO007516 (23 genes in 21 species)
ORTHO048033 (2 genes in 2 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (4 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM004691 has 30 genes in 21 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 30 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL8G31340 aly name=fgenesh2_kg.8__2491__AT5G64630.2;pid=496675;prot=eq;tid=496675 + scaffold_8 No
AT5G64630 ath Chromatin Assembly Factor-1 (CAF-1) p60 subunit. Involved in organization of the shoot and root apical meristems. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis.;Transducin/WD40 repeat-like superfamily protein transcript=eq;prot=eq; + 5 No
BD3G13280 bdi microtubule-severing ATPase activity (Blast2GO) pid=Bradi3g13280.1;tid=Bradi3g13280.1;GeneName=Bradi3g13280;transcript=eq;prot=eq + Bd3 No
CP00042G01280 cpa name=evm.TU.supercontig_42.128;pid=evm.TU.supercontig_42.128;prot=eq;transcript=eq - supercontig_42 No
CP00042G01330 cpa name=evm.TU.supercontig_42.133;pid=evm.TU.supercontig_42.133;prot=eq;transcript=eq - supercontig_42 No
CP03234G00020 cpa name=evm.TU.supercontig_3234.2;pid=evm.TU.supercontig_3234.2;prot=eq;transcript=eq - supercontig_3234 No
CP33663G00010 cpa name=evm.TU.contig_33663.1;pid=evm.TU.contig_33663.1;prot=eq;transcript=eq + contig_33663 No
FV1G21030 fve Chromatin assembly factor 1 subunit B (CAF-1 subunit B) (probable) transcript=eq;prot=eq;pid=gene17888 - LG1 No
GM05G32430 gma 05 pid=16260421;transcript=eq;prot=eq;name=Glyma05g32430.1 - Gm05 No
GM08G16590 gma 08 pid=16271385;transcript=eq;prot=eq;name=Glyma08g16590.1 - Gm08 No
LJ4G029530 lja prot=eq;transcript=eq;scaffold=CM0680;name=chr4.CM0680.230.nc - chr4 No
MD00G037440 mdo transcript=eq;prot=eq;pid=MDP0000919823;tid=MDP0000919823;contig=MDC001586.157 - MDC001586.157 No
MD00G037450 mdo transcript=eq;prot=eq;pid=MDP0000951863;tid=MDP0000951863;contig=MDC001586.166 + MDC001586.166 No
MD00G246370 mdo transcript=eq;prot=eq;pid=MDP0000194135;tid=MDP0000194135;contig=MDC010610.302 + MDC010610.302 No
MD00G403610 mdo transcript=eq;prot=eq;pid=MDP0000300423;tid=MDP0000300423;contig=MDC018334.224 - MDC018334.224 No
ME09150G00190 mes PACid=17990948;RNAname=cassava4.1_007244m;GeneName=cassava4.1_007244m.g;transcript=eq;prot=eq + scaffold09150 No
MRCC299_05G02360 mrcc299 name=EuGene.0500010238;pid=58505;prot=eq;tid=58505;transcript=eq - Chr_05 No
MT8G093540 mtr Chromatin assembly factor 1 subunit B (AHRD V1 **-- Q13112); contains Interpro domain(s) IPR017986 WD40 repeat, region transcript=eq;prot=eq;pid=Medtr8g093540.1; - 8 No
OL02G01430 olu NULL name=fgenesh1_pg.C_Chr_2000109,prot=none + Chr_2 No
OS08G01680 osa WD domain, G%2Dbeta repeat domain containing protein, expressed transcript=eq;prot=eq; + 8 No
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