Gene family  

Sub-families
ORTHO010090 (19 genes in 10 species)
ORTHO017067 (8 genes in 7 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (6 genes)
gma
Glycine max (5 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (3 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (3 genes)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (2 genes)



The gene family HOM004638 has 31 genes in 12 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 31 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G26030 aly name=scaffold_402705.1;pid=903204;prot=eq;tid=934717 - scaffold_4 No
AL4G26040 aly name=scaffold_402706.1;pid=903205;prot=eq;tid=934718 - scaffold_4 No
AT2G39518 ath Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G39530.1); Has 160 Blast hits to 160 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Uncharacterised protein family (UPF0497) transcript=eq;prot=eq; - 2 No
AT2G39530 ath Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G39518.1); Has 200 Blast hits to 200 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Uncharacterised protein family (UPF0497) transcript=eq;prot=eq; - 2 No
CP00361G00010 cpa name=evm.TU.supercontig_361.1;pid=evm.TU.supercontig_361.1;prot=eq;transcript=eq - supercontig_361 No
FV5G16060 fve UPF0497 membrane protein At2g39518 (probable) transcript=eq;prot=eq;pid=gene09320 + LG5 No
FV5G16080 fve UPF0497 membrane protein At2g39530 (probable) transcript=eq;prot=eq;pid=gene09322 + LG5 No
FV7G26600 fve UPF0497 membrane protein At2g39518 (probable) transcript=eq;prot=eq;pid=gene26624 - LG7 Yes
FV7G26610 fve UPF0497 membrane protein At2g39518 (probable) transcript=eq;prot=eq;pid=gene26625 - LG7 No
FV7G26620 fve UPF0497 membrane protein At2g39518 (probable) transcript=eq;prot=eq;pid=gene26626 - LG7 No
FV7G26630 fve UPF0497 membrane protein At2g39518 (probable) transcript=eq;prot=eq;pid=gene26627 - LG7 No
GM02G10230 gma 02 pid=16247598;transcript=eq;prot=eq;name=Glyma02g10230.1 - Gm02 No
GM02G10240 gma 02 pid=16247599;transcript=eq;prot=eq;name=Glyma02g10240.1 - Gm02 No
GM18G52670 gma 18 pid=16311261;transcript=eq;prot=eq;name=Glyma18g52670.1 + Gm18 No
GM18G52680 gma 18 pid=16311262;transcript=eq;prot=eq;name=Glyma18g52680.1 + Gm18 No
GM18G52700 gma 18 pid=16311264;transcript=eq;prot=eq;name=Glyma18g52700.1 + Gm18 No
MD14G022370 mdo transcript=eq;prot=eq;pid=MDP0000142126;tid=MDP0000142126;contig=MDC013216.338 - 14 No
ME02987G00030 mes PACid=17992617;RNAname=cassava4.1_028785m;GeneName=cassava4.1_028785m.g;transcript=eq;prot=eq + scaffold02987 No
ME08799G00900 mes PACid=17984709;RNAname=cassava4.1_030921m;GeneName=cassava4.1_030921m.g;transcript=eq;prot=eq + scaffold08799 No
MT6G073040 mtr UPF0497 membrane protein 17 (AHRD V1 *-*- C6T1Z6); contains Interpro domain(s) IPR006702 Uncharacterised protein family UPF0497, trans-membrane plant transcript=eq;prot=eq;pid=Medtr6g073040.1; + 6 No
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