Gene family 
- Id
- HOM004612
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO005481 (25 genes in 20 species)
ORTHO071685 (2 genes in 1 species)
ORTHO073792 (2 genes in 2 species)
View all sub-families (3)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (2 genes)
- ath
- Arabidopsis thaliana (2 genes)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (1 gene)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (2 genes)
- lja
- Lotus japonicus (1 gene)
- mdo
- Malus domestica (2 genes)
- mes
- Manihot esculenta (2 genes)
- mtr
- Medicago truncatula (2 genes)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (1 gene)
- ppa
- Physcomitrella patens (3 genes)
- ptr
- Populus trichocarpa (2 genes)
- rco
- Ricinus communis (1 gene)
- sbi
- Sorghum bicolor (2 genes)
- smo
- Selaginella moellendorffii (1 gene)
- tca
- Theobroma cacao (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (2 genes)
The gene family HOM004612 has 31 genes in 20 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM004612
Page 1 of 2, showing 20 records out of 31 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL1G10850 | aly | name=fgenesh2_kg.1__1160__AT1G10740.1;pid=471206;prot=eq;tid=471206 | - | scaffold_1 | No | |
| AL1G25170 | aly | name=fgenesh2_kg.1__2546__AT1G23330.1;pid=472592;prot=eq;tid=472592 | - | scaffold_1 | No | |
| AT1G10740 | ath | alpha/beta-Hydrolases superfamily protein; INVOLVED IN: glycerol biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G23330.1); Has 782 Blast hits to 782 proteins in 229 species: Archae - 0; Bacteria - 631; Metazoa - 3; Fungi - 4; Plants - 47; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein | transcript=eq;prot=eq; | - | 1 | No |
| AT1G23330 | ath | alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G10740.4); Has 777 Blast hits to 777 proteins in 229 species: Archae - 0; Bacteria - 631; Metazoa - 3; Fungi - 4; Plants - 47; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein | transcript=eq;prot=eq; | - | 1 | No |
| BD2G25570 | bdi | pid=Bradi2g25570.1;tid=Bradi2g25570.1;GeneName=Bradi2g25570;transcript=eq;prot=eq | + | Bd2 | No | |
| CP00069G00930 | cpa | name=evm.TU.supercontig_69.93;pid=evm.TU.supercontig_69.93;prot=eq;transcript=eq | + | supercontig_69 | No | |
| FV0G00090 | fve | Lipase 46 kDa form, Precursor (probable) | transcript=eq;prot=eq;pid=gene03585 | + | scf0513158 | No |
| GM01G03360 | gma | 01 | pid=16243261;transcript=eq;prot=eq;name=Glyma01g03360.1 | - | Gm01 | No |
| GM02G04250 | gma | 02 | pid=16246934;transcript=eq;prot=eq;name=Glyma02g04250.1 | + | Gm02 | No |
| LJ2G018640 | lja | prot=eq;transcript=eq;scaffold=CM0008;name=chr2.CM0008.550.nc | + | chr2 | No | |
| MD13G007140 | mdo | transcript=eq;prot=eq;pid=MDP0000310222;tid=MDP0000310222;contig=MDC022252.142 | + | 13 | No | |
| MD16G005580 | mdo | transcript=eq;prot=eq;pid=MDP0000143011;tid=MDP0000143011;contig=MDC025815.15 | + | 16 | No | |
| ME04175G00040 | mes | PACid=17963384;RNAname=cassava4.1_007053m;GeneName=cassava4.1_007053m.g;transcript=eq;prot=eq | + | scaffold04175 | No | |
| ME12211G00060 | mes | PACid=17986459;RNAname=cassava4.1_007050m;GeneName=cassava4.1_007050m.g;transcript=eq;prot=eq | + | scaffold12211 | No | |
| MT5G033580 | mtr | Lipase (AHRD V1 ***- B6UAB9_MAIZE) | transcript=eq;prot=eq;pid=Medtr5g033580.1; | - | 5 | No |
| MT5G033590 | mtr | Lipase (AHRD V1 ***- B6UAB9_MAIZE) | transcript=eq;prot=eq;pid=Medtr5g033590.1; | - | 5 | No |
| OS05G33820 | osa | lipase, putative, expressed | transcript=eq;prot=eq; | - | 5 | No |
| OSINDICA_05G30230 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC021191; | - | Chr05 | No |
| PP00027G01690 | ppa | NULL | name=fgenesh1_pg.scaffold_27000174,pid=70345,prot=eq,tid=70345 | + | scaffold_27 | No |
| PP00028G02030 | ppa | NULL | name=estExt_gwp_gw1.C_280305,pid=178181,prot=eq,tid=178181 | + | scaffold_28 | No |