Gene family  

Sub-families
ORTHO006634 (24 genes in 23 species)
ORTHO030386 (4 genes in 1 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (5 genes)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM004555 has 31 genes in 23 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 31 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G20340 aly name=fgenesh2_kg.6__2035__AT5G20040.1;pid=488901;prot=eq;tid=488901 - scaffold_6 No
AT5G20040 ath Encodes tRNA isopentenyltransferase AtIPT9.;isopentenyltransferase 9 transcript=eq;prot=eq; - 5 No
BD1G29490 bdi ATP binding (Blast2GO) pid=Bradi1g29490.1;tid=Bradi1g29490.1;GeneName=Bradi1g29490;transcript=eq;prot=eq - Bd1 No
CP00131G00620 cpa name=evm.TU.supercontig_131.62;pid=evm.TU.supercontig_131.62;prot=eq;transcript=eq + supercontig_131 No
CR17G04430 cre name=pasa_Sanger_mRNA16513;pid=409217;prot=eq;tid=406846;transcript=eq + chromosome_17 No
GM13G34680 gma 13 pid=16292623;transcript=eq;prot=eq;name=Glyma13g34680.1 + Gm13 No
LJ0G213160 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_068775;name=LjSGA_068775.1 + LjSGA_068775 No
LJ3G010750 lja partial;prot=eq;transcript=eq;scaffold=CM0111;name=chr3.CM0111.600.nd + chr3 No
MD00G264960 mdo transcript=eq;prot=eq;pid=MDP0000126210;tid=MDP0000126210;contig=MDC011364.106 - MDC011364.106 No
MD10G005190 mdo transcript=eq;prot=eq;pid=MDP0000229072;tid=MDP0000229072;contig=MDC025080.77 + 10 No
ME03741G00570 mes PACid=17987211;RNAname=cassava4.1_007486m;GeneName=cassava4.1_007486m.g;transcript=eq;prot=eq + scaffold03741 No
MRCC299_02G08290 mrcc299 name=gw2.02.328.1;pid=68379;prot=eq;tid=68379;transcript=eq - Chr_02 No
OL06G04410 olu NULL name=gwEuk.6.256.1,pid=3723,prot=eq,tid=3723 - Chr_6 No
OS06G51350 osa IPP transferase, putative, expressed transcript=eq;prot=eq; + 6 No
OSINDICA_06G46750 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC039341; + Chr06 No
OT06G04820 ota tRNA isopentenyltransferase 9 / IPP transferase 9 (ISS); name=OT06G04820;protein_id=CAL53743.1;prot=eq - chrom06 No
PP00014G02110 ppa NULL name=fgenesh1_pg.scaffold_14000223,pid=67435,prot=eq,tid=67435 + scaffold_14 No
PP00064G00730 ppa NULL name=fgenesh1_pg.scaffold_64000074,pid=77322,prot=eq,tid=77322 + scaffold_64 No
PP00096G00590 ppa NULL name=estExt_fgenesh1_pg.C_960062,pid=165772,prot=eq,tid=165772 - scaffold_96 No
PP00280G00030 ppa NULL name=fgenesh1_pg.scaffold_280000003,pid=95404,prot=eq,tid=95404 - scaffold_280 No
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