Gene family  

Sub-families
ORTHO006938 (23 genes in 19 species)
ORTHO074001 (2 genes in 2 species)
ORTHO074002 (2 genes in 1 species)
View all sub-families (3)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (6 genes)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM004443 has 32 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 32 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G21120 aly name=fgenesh2_kg.1__2185__AT1G20050.1;pid=472231;prot=eq;tid=472231 + scaffold_1 No
AT1G20050 ath C-8 sterol isomerase;C-8,7 sterol isomerase transcript=eq;prot=eq; + 1 No
BD2G03530 bdi cholestenol delta-isomerase activity, C-8 sterol isomerase activity (Blast2GO) pid=Bradi2g03530.1;tid=Bradi2g03530.1;GeneName=Bradi2g03530;transcript=eq;prot=eq + Bd2 No
CP00038G00530 cpa name=evm.TU.supercontig_38.54;pid=evm.TU.supercontig_38.54;prot=eq;transcript=eq - supercontig_38 No
CR12G15450 cre name=acegs_kg.scaffold_80000017;pid=160258;prot=eq;tid=160258;transcript=eq + chromosome_12 No
FV5G09750 fve Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase (D8-D7 sterol isomerase) (similar to) transcript=eq;prot=eq;pid=gene00204 + LG5 No
GM09G31870 gma 09 pid=16276874;transcript=eq;prot=eq;name=Glyma09g31870.1 + Gm09 No
GM09G31880 gma 09 pid=16276876;transcript=eq;prot=eq;name=Glyma09g31880.1 + Gm09 No
GM09G31890 gma 09 pid=16276877;transcript=eq;prot=eq;name=Glyma09g31890.1 + Gm09 No
GM13G03380 gma 13 pid=16289518;transcript=eq;prot=eq;name=Glyma13g03380.1 - Gm13 No
LJ0G322900 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_113545;name=LjSGA_113545.1 + LjSGA_113545 No
MD04G005520 mdo transcript=eq;prot=eq;pid=MDP0000202546;tid=MDP0000202546;contig=MDC011656.190 - 4 No
MD13G010950 mdo transcript=eq;prot=eq;pid=MDP0000131723;tid=MDP0000131723;contig=MDC020426.207 + 13 No
ME08265G01230 mes PACid=17988742;RNAname=cassava4.1_015812m;GeneName=cassava4.1_015812m.g;transcript=eq;prot=eq + scaffold08265 No
OS01G01369 osa 3%2Dbeta%2Dhydroxysteroid%2DDelta%2Disomerase, putative, expressed transcript=eq;prot=eq; - 1 No
PP00089G00110 ppa NULL name=fgenesh2_pg.scaffold_89000013,pid=229915,prot=eq,tid=229915 - scaffold_89 No
PT01G12530 ptr PACid=17338487;name=POPTR_0001s12720;alias=pt041442m; transcript=eq;prot=eq;protein_id=17338487; - scaffold_1 No
PT01G12540 ptr PACid=17319392;name=POPTR_0001s12730;alias=pt041292m; transcript=eq;prot=eq;protein_id=17319392; - scaffold_1 No
PT03G14930 ptr PACid=17330264;name=POPTR_0003s15880;alias=pt023994m,Pt-HYD1.2,eugene3.00031298; transcript=eq;prot=eq;protein_id=17330264; - scaffold_3 No
RC30128G04830 rco name=30128.m008583;gene=30128.t000044;note=30128.t000044;transcript=eq;prot=eq + 30128 No
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