Gene family  

Sub-families
No subfamilies present
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
mdo
Malus domestica (5 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM004356 has 32 genes in 23 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 32 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G39780 aly name=fgenesh1_pg.C_scaffold_1003370;pid=336805;prot=eq;tid=336805 + scaffold_1 No
AL1G39790 aly name=fgenesh1_pg.C_scaffold_1003371;pid=336806;prot=eq;tid=336806 + scaffold_1 No
AT1G45110 ath Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0011, conserved site (InterPro:IPR018063), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Uncharacterised protein family UPF0011 (InterPro:IPR008189); Has 8880 Blast hits to 8878 proteins in 2458 species: Archae - 59; Bacteria - 5736; Metazoa - 2; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 2997 (source: NCBI BLink).;Tetrapyrrole (Corrin/Porphyrin) Methylases transcript=eq;prot=eq; + 1 No
BD3G26680 bdi pid=Bradi3g26680.1;tid=Bradi3g26680.1;GeneName=Bradi3g26680;transcript=eq;prot=eq - Bd3 No
CP00099G00140 cpa name=evm.TU.supercontig_99.14;pid=evm.TU.supercontig_99.14;prot=eq;transcript=eq - supercontig_99 No
CP00099G00150 cpa name=evm.TU.supercontig_99.15;pid=evm.TU.supercontig_99.15;prot=eq;transcript=eq - supercontig_99 No
CR13G02090 cre name=estExt_gwp_1H.C_20004;pid=127404;prot=eq;tid=127404;transcript=eq - chromosome_13 No
FV2G50320 fve Ubiquitin-conjugating enzyme 15 (similar to) transcript=eq;prot=eq;pid=gene15203 - LG2 No
GM06G03190 gma 06 pid=16261540;transcript=eq;prot=eq;name=Glyma06g03190.1 - Gm06 No
MD00G081460 mdo transcript=eq;prot=eq;pid=MDP0000168604;tid=MDP0000168604;contig=MDC003445.190 - MDC003445.190 No
MD00G400280 mdo transcript=eq;prot=eq;pid=MDP0000322173;tid=MDP0000322173;contig=MDC018214.326 - MDC018214.326 No
MD00G413450 mdo transcript=eq;prot=eq;pid=MDP0000214917;tid=MDP0000214917;contig=MDC018827.586 + MDC018827.586 No
MD08G001510 mdo transcript=eq;prot=eq;pid=MDP0000174759;tid=MDP0000174759;contig=MDC003445.193 - 8 No
MD15G033210 mdo transcript=eq;prot=eq;pid=MDP0000158302;tid=MDP0000158302;contig=MDC000836.210 + 15 No
ME07012G01000 mes PACid=17960423;RNAname=cassava4.1_026843m;GeneName=cassava4.1_026843m.g;transcript=eq;prot=eq + scaffold07012 No
ME09657G00100 mes PACid=17969665;RNAname=cassava4.1_029282m;GeneName=cassava4.1_029282m.g;transcript=eq;prot=eq + scaffold09657 No
MRCC299_08G00930 mrcc299 name=fgenesh2_pg.C_Chr_08000061;pid=101770;prot=eq;tid=101770;transcript=eq + Chr_08 No
OL20G00640 olu NULL name=gwEuk.20.250.1,pid=6302,prot=eq,tid=6302 + Chr_20 No
OS10G27450 osa tetrapyrrole methylase family protein, putative, expressed transcript=eq;prot=eq; - 10 No
OSINDICA_00G09740 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFSC048739; + Scaffold021663 No
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