Gene family  

Sub-families
ORTHO004457 (27 genes in 24 species)
ORTHO044870 (2 genes in 2 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (3 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (2 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family HOM004346 has 32 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 32 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G32260 aly name=scaffold_403376.1;pid=903875;prot=eq;tid=935388 + scaffold_4 No
AL6G03110 aly name=fgenesh2_kg.6__296__AT5G03830.1;pid=487162;prot=eq;tid=487162 + scaffold_6 No
AT2G44510 ath CDK inhibitor P21 binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: CDK inhibitor P21 binding protein (TAIR:AT5G03830.1); Has 392 Blast hits to 392 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 138; Plants - 52; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).;CDK inhibitor P21 binding protein transcript=eq;prot=eq; + 2 No
AT5G03830 ath CDK inhibitor P21 binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: CDK inhibitor P21 binding protein (TAIR:AT2G44510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;CDK inhibitor P21 binding protein transcript=eq;prot=eq; + 5 No
BD1G01070 bdi pid=Bradi1g01070.1;tid=Bradi1g01070.1;GeneName=Bradi1g01070;transcript=eq;prot=eq - Bd1 No
CP01084G00040 cpa name=evm.TU.supercontig_1084.4;pid=evm.TU.supercontig_1084.4;prot=eq;transcript=eq + supercontig_1084 No
CR19G00180 cre name=pg.19_#_14;pid=333500;prot=eq;tid=333507;transcript=eq - scaffold_19 No
FV0G08420 fve Protein BCCIP homolog (probable) transcript=eq;prot=eq;pid=gene06209 + scf0513158 No
GM08G10100 gma 08 pid=16270616;transcript=eq;prot=eq;name=Glyma08g10100.1 + Gm08 No
GM11G26140 gma 11 pid=16284715;transcript=eq;prot=eq;name=Glyma11g26140.1 + Gm11 No
GM14G23870 gma 14 pid=16295900;transcript=eq;prot=eq;name=Glyma14g23870.1 + Gm14 No
MD00G456960 mdo transcript=eq;prot=eq;pid=MDP0000403162;tid=MDP0000403162;contig=MDC021107.66 - MDC021107.66 No
ME04716G00230 mes PACid=17969707;RNAname=cassava4.1_029924m;GeneName=cassava4.1_029924m.g;transcript=eq;prot=eq - scaffold04716 No
ME09354G00120 mes PACid=17982338;RNAname=cassava4.1_021583m;GeneName=cassava4.1_021583m.g;transcript=eq;prot=eq + scaffold09354 No
MRCC299_05G04230 mrcc299 name=EuGene.0500010419;pid=58686;prot=eq;tid=58686;transcript=eq + Chr_05 No
MT3G088850 mtr Protein BCCIP homolog (AHRD V1 ***- O64885) transcript=eq;prot=eq;pid=Medtr3g088850.1; + 3 No
MT3G096970 mtr Protein BCCIP homolog (AHRD V1 ***- O64885) transcript=eq;prot=eq;pid=Medtr3g096970.1; + 3 No
OL05G03660 olu NULL name=e_gwEuk.5.354.1,pid=38561,prot=eq,tid=38561 + Chr_5 No
OS03G63690 osa BCCIP, putative, expressed transcript=eq;prot=eq; - 3 No
OSINDICA_03G60760 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC009022; - Chr03 No
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