Gene family  

Sub-families
ORTHO009703 (20 genes in 16 species)
ORTHO055068 (2 genes in 1 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (3 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (1 gene)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (3 genes)
osa
Oryza sativa ssp. japonica (3 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (5 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family HOM004314 has 32 genes in 16 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 32 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AT1G61000 ath FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Kinetochore protein Nuf2 (InterPro:IPR005549); Has 50972 Blast hits to 29793 proteins in 2070 species: Archae - 902; Bacteria - 7404; Metazoa - 23628; Fungi - 4156; Plants - 2312; Viruses - 158; Other Eukaryotes - 12412 (source: NCBI BLink). transcript=eq;prot=eq; - 1 No
BD1G01540 bdi pid=Bradi1g01540.1;tid=Bradi1g01540.1;GeneName=Bradi1g01540;transcript=eq;prot=eq - Bd1 No
BD1G01670 bdi ATPase activity, coupled (Blast2GO) pid=Bradi1g01670.1;tid=Bradi1g01670.1;GeneName=Bradi1g01670;transcript=eq;prot=eq + Bd1 No
BD2G41450 bdi pid=Bradi2g41450.1;tid=Bradi2g41450.1;GeneName=Bradi2g41450;transcript=eq;prot=eq + Bd2 No
CP00008G02550 cpa name=evm.TU.supercontig_8.256;pid=evm.TU.supercontig_8.256;prot=eq;transcript=eq - supercontig_8 No
FV6G33610 fve Kinetochore protein nuf2 (probable) transcript=eq;prot=eq;pid=gene21920 - LG6 No
FV7G17550 fve Kinetochore protein nuf2 (probable) transcript=eq;prot=eq;pid=gene09195 + LG7 No
GM05G30280 gma 05 pid=16260154;transcript=eq;prot=eq;name=Glyma05g30280.1 - Gm05 No
MD00G085650 mdo transcript=eq;prot=eq;pid=MDP0000274608;tid=MDP0000274608;contig=MDC003645.562 - MDC003645.562 No
MD00G268230 mdo transcript=eq;prot=eq;pid=MDP0000184625;tid=MDP0000184625;contig=MDC011504.324 - MDC011504.324 No
MD00G313820 mdo transcript=eq;prot=eq;pid=MDP0000378591;tid=MDP0000378591;contig=MDC013309.394 + MDC013309.394 No
MD00G363000 mdo transcript=eq;prot=eq;pid=MDP0000307795;tid=MDP0000307795;contig=MDC016321.217 - MDC016321.217 No
ME00345G00020 mes PACid=17965335;RNAname=cassava4.1_007861m;GeneName=cassava4.1_007861m.g;transcript=eq;prot=eq + scaffold00345 No
MT4G049650 mtr Kinetochore protein Nuf2 (AHRD V1 ***- Q7ZW63); contains Interpro domain(s) IPR005549 Kinetochore protein Nuf2 transcript=eq;prot=eq;pid=Medtr4g049650.1; - 4 No
MT8G088800 mtr Kinetochore protein Nuf2 (AHRD V1 *-*- Q7ZW63); contains Interpro domain(s) IPR005549 Kinetochore protein Nuf2 transcript=eq;prot=eq;pid=Medtr8g088800.1; - 8 No
MT8G088840 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR005549 Kinetochore protein Nuf2 transcript=eq;prot=eq;pid=Medtr8g088840.1; + 8 No
OS03G38010 osa nuf2 family protein, expressed transcript=eq;prot=eq; - 3 No
OS08G06600 osa nuf2 family protein, expressed transcript=eq;prot=eq; - 8 No
OS09G10580 osa hypothetical protein transcript=eq;prot=eq; + 9 Yes
OSINDICA_08G05450 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC025281; - Chr08 No
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