Gene family 
- Id
- HOM004281
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO005462 (25 genes in 19 species)
ORTHO041530 (2 genes in 2 species)
ORTHO044111 (2 genes in 2 species)
View all sub-families (4)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (4 genes)
- ath
- Arabidopsis thaliana (4 genes)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (1 gene)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (6 genes)
- mdo
- Malus domestica (1 gene)
- mes
- Manihot esculenta (1 gene)
- mtr
- Medicago truncatula (1 gene)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (1 gene)
- ppa
- Physcomitrella patens (1 gene)
- ptr
- Populus trichocarpa (1 gene)
- rco
- Ricinus communis (2 genes)
- sbi
- Sorghum bicolor (1 gene)
- smo
- Selaginella moellendorffii (3 genes)
- tca
- Theobroma cacao (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (1 gene)
The gene family HOM004281 has 33 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM004281
Page 1 of 2, showing 20 records out of 33 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL1G05260 | aly | name=fgenesh2_kg.1__534__AT1G05730.1;pid=470580;prot=eq;tid=470580 | + | scaffold_1 | No | |
| AL1G05270 | aly | name=Al_scaffold_0001_512;pid=878745;prot=eq;tid=910258 | + | scaffold_1 | No | |
| AL4G16640 | aly | name=fgenesh2_kg.4__1155__AT2G31725.1;pid=482095;prot=eq;tid=482095 | - | scaffold_4 | No | |
| AL4G31300 | aly | name=fgenesh2_kg.4__2546__AT2G43720.1;pid=483486;prot=eq;tid=483486 | + | scaffold_4 | No | |
| AT1G05730 | ath | Eukaryotic protein of unknown function (DUF842); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF842, eukaryotic (InterPro:IPR008560); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF842) (TAIR:AT2G31725.1); Has 245 Blast hits to 245 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 169; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).;Eukaryotic protein of unknown function (DUF842) | transcript=eq;prot=eq; | + | 1 | No |
| AT1G05740 | ath | Eukaryotic protein of unknown function (DUF842); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF842, eukaryotic (InterPro:IPR008560); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF842) (TAIR:AT1G05730.1); Has 144 Blast hits to 144 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 83; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).;Eukaryotic protein of unknown function (DUF842) | transcript=eq;prot=eq; | + | 1 | No |
| AT2G31725 | ath | Eukaryotic protein of unknown function (DUF842); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF842, eukaryotic (InterPro:IPR008560); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF842) (TAIR:AT1G05730.1); Has 259 Blast hits to 259 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 173; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).;Eukaryotic protein of unknown function (DUF842) | transcript=eq;prot=eq; | - | 2 | No |
| AT2G43720 | ath | Eukaryotic protein of unknown function (DUF842); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF842, eukaryotic (InterPro:IPR008560); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF842) (TAIR:AT2G31725.1); Has 263 Blast hits to 263 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 179; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).;Eukaryotic protein of unknown function (DUF842) | transcript=eq;prot=eq; | + | 2 | No |
| BD4G20800 | bdi | pid=Bradi4g20800.1;tid=Bradi4g20800.1;GeneName=Bradi4g20800;transcript=eq;prot=eq | + | Bd4 | No | |
| CP00009G03650 | cpa | name=evm.TU.supercontig_9.365;pid=evm.TU.supercontig_9.365;prot=eq;transcript=eq | + | supercontig_9 | No | |
| FV0G32430 | fve | Protein FAM136A (probable) | transcript=eq;prot=eq;pid=gene14007 | + | scf0513178 | No |
| GM02G06480 | gma | 02 | pid=16247186;transcript=eq;prot=eq;name=Glyma02g06480.1 | - | Gm02 | No |
| GM04G13180 | gma | 04 | pid=16255807;transcript=eq;prot=eq;name=Glyma04g13180.1 | - | Gm04 | No |
| GM06G44180 | gma | 06 | pid=16265124;transcript=eq;prot=eq;name=Glyma06g44180.1 | - | Gm06 | No |
| GM06G44210 | gma | 06 | pid=16265127;transcript=eq;prot=eq;name=Glyma06g44210.1 | - | Gm06 | No |
| GM06G47800 | gma | 06 | pid=16265521;transcript=eq;prot=eq;name=Glyma06g47800.1 | + | Gm06 | No |
| GM06G47810 | gma | 06 | pid=16265522;transcript=eq;prot=eq;name=Glyma06g47810.1 | + | Gm06 | No |
| MD05G011340 | mdo | transcript=eq;prot=eq;pid=MDP0000379106;tid=MDP0000379106;contig=MDC003521.145 | + | 5 | No | |
| ME07947G00020 | mes | PACid=17972798;RNAname=cassava4.1_018415m;GeneName=cassava4.1_018415m.g;transcript=eq;prot=eq | - | scaffold07947 | No | |
| MT3G009130 | mtr | Protein FAM136A (AHRD V1 ***- Q6PBU0); contains Interpro domain(s) IPR008560 Protein of unknown function DUF842, eukaryotic | transcript=eq;prot=eq;pid=Medtr3g009130.1; | + | 3 | No |