Gene family  

Sub-families
ORTHO007016 (23 genes in 19 species)
ORTHO053443 (2 genes in 1 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (5 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family HOM004155 has 33 genes in 18 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 33 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G07880 aly name=fgenesh2_kg.2__579__AT1G58025.1;pid=475449;prot=eq;tid=475449 + scaffold_2 No
AL2G08060 aly name=fgenesh2_kg.2__592__AT1G58025.1;pid=475462;prot=eq;tid=475462 - scaffold_2 No
AT1G58025 ath DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1).;DNA-binding bromodomain-containing protein transcript=eq;prot=eq; - 1 No
BD3G13380 bdi histone acetyltransferase activity (Blast2GO) pid=Bradi3g13380.1;tid=Bradi3g13380.1;GeneName=Bradi3g13380;transcript=eq;prot=eq + Bd3 No
CP00113G00440 cpa name=evm.TU.supercontig_113.44;pid=evm.TU.supercontig_113.44;prot=eq;transcript=eq - supercontig_113 No
FV5G38600 fve Putative ribonuclease H protein At1g65750 (probable) transcript=eq;prot=eq;pid=gene29592 - LG5 No
GM12G28810 gma 12 pid=16288219;transcript=eq;prot=eq;name=Glyma12g28810.1 + Gm12 No
GM12G28820 gma 12 pid=16288220;transcript=eq;prot=eq;name=Glyma12g28820.1 + Gm12 No
GM16G00460 gma 16 pid=16300975;transcript=eq;prot=eq;name=Glyma16g00460.1 + Gm16 No
GM16G00470 gma 16 pid=16300976;transcript=eq;prot=eq;name=Glyma16g00470.1 + Gm16 No
LJ6G020250 lja partial;prot=eq;transcript=eq;scaffold=CM0885;name=chr6.CM0885.280.nc - chr6 No
LJ6G020310 lja prot=eq;transcript=eq;scaffold=CM0885;name=chr6.CM0885.340.nc - chr6 No
MD00G292400 mdo transcript=eq;prot=eq;pid=MDP0000555986;tid=MDP0000555986;contig=MDC012485.262 + MDC012485.262 No
MD00G292440 mdo transcript=eq;prot=eq;pid=MDP0000554975;tid=MDP0000554975;contig=MDC012485.266 - MDC012485.266 No
MD15G035680 mdo transcript=eq;prot=eq;pid=MDP0000390773;tid=MDP0000390773;contig=MDC002206.332 + 15 No
MD15G035710 mdo transcript=eq;prot=eq;pid=MDP0000289226;tid=MDP0000289226;contig=MDC010433.137 + 15 No
MD15G035730 mdo transcript=eq;prot=eq;pid=MDP0000146087;tid=MDP0000146087;contig=MDC000026.494 + 15 No
ME02538G00210 mes PACid=17974787;RNAname=cassava4.1_013572m;GeneName=cassava4.1_013572m.g;transcript=eq;prot=eq + scaffold02538 No
ME02538G00220 mes PACid=17974792;RNAname=cassava4.1_004162m;GeneName=cassava4.1_004162m.g;transcript=ne;prot=eq + scaffold02538 No
MT2G005820 mtr Bromodomain-containing protein 3 (AHRD V1 *-*- Q15059); contains Interpro domain(s) IPR001487 Bromodomain IPR018359 Bromodomain, conserved site transcript=eq;prot=eq;pid=Medtr2g005820.1; + 2 No
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