Gene family  

Sub-families
ORTHO005567 (25 genes in 20 species)
ORTHO026762 (4 genes in 3 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (6 genes)



The gene family HOM004150 has 33 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 33 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G38660 aly name=fgenesh2_kg.1__3718__AT1G43580.1;pid=473764;prot=eq;tid=473764 - scaffold_1 No
AT1G43580 ath Sphingomyelin synthetase family protein; Has 50 Blast hits to 47 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).;Sphingomyelin synthetase family protein transcript=eq;prot=eq; - 1 No
BD3G45327 bdi pid=Bradi3g45327.1;tid=Bradi3g45327.1;GeneName=Bradi3g45327;transcript=eq;prot=eq - Bd3 No
BD5G10060 bdi pid=Bradi5g10060.1;tid=Bradi5g10060.1;GeneName=Bradi5g10060;transcript=eq;prot=eq - Bd5 No
CP00021G02050 cpa name=evm.TU.supercontig_21.205;pid=evm.TU.supercontig_21.205;prot=eq;transcript=eq + supercontig_21 No
FV2G21570 fve Major centromere autoantigen B (Centromere protein B) (probable) transcript=eq;prot=eq;pid=gene08128 + LG2 No
GM10G36860 gma 10 pid=16281227;transcript=eq;prot=eq;name=Glyma10g36860.1 + Gm10 No
GM20G30750 gma 20 pid=16317416;transcript=eq;prot=eq;name=Glyma20g30750.1 - Gm20 No
LJ5G024110 lja prot=eq;transcript=eq;scaffold=CM0052;name=chr5.CM0052.90.nc - chr5 No
MD09G027340 mdo transcript=eq;prot=eq;pid=MDP0000861131;tid=MDP0000861131;contig=MDC008830.355 - 9 No
MD10G001850 mdo transcript=eq;prot=eq;pid=MDP0000290504;tid=MDP0000290504;contig=MDC008830.346 + 10 No
ME02939G00070 mes PACid=17987868;RNAname=cassava4.1_008217m;GeneName=cassava4.1_008217m.g;transcript=eq;prot=eq + scaffold02939 No
MT1G098650 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr1g098650.1; + 1 No
OS02G33830 osa conserved hypothetical protein transcript=eq;prot=eq; - 2 No
OS04G34620 osa expressed protein transcript=eq;prot=eq; - 4 No
OSINDICA_02G32600 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC014237; - Chr02 No
OSINDICA_04G26910 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC017532; - Chr04 No
PP00021G00710 ppa NULL name=gw1.21.78.1,pid=23480,prot=eq,tid=23480 - scaffold_21 No
PP00058G01040 ppa NULL name=e_gw1.58.196.1,pid=126060,prot=eq,tid=126060 + scaffold_58 No
PT02G06560 ptr PACid=17331791;name=POPTR_0002s06750;alias=pt020433m,estExt_fgenesh4_pg.C_LG_II0615; transcript=eq;prot=eq;protein_id=17331791; - scaffold_2 No
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