Gene family  

Sub-families
ORTHO005874 (25 genes in 23 species)
ORTHO073463 (2 genes in 2 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (3 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (6 genes)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM004070 has 34 genes in 23 species (3 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 34 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G00430 aly name=fgenesh2_kg.6__43__AT4G00020.1;pid=486909;prot=eq;tid=486909 + scaffold_6 No
AT4G00020 ath Ortholog of breast cancer susceptibility protein 2. Essential at meiosis. Interacts with either AtRad51 or AtDmc1 and ATDSS1(I). Involved in embryo sac development.;BREAST CANCER 2 like 2A transcript=eq;prot=eq; - 4 No
AT5G01630 ath Ortholog of breast cancer susceptibility protein 2. Essential at meiosis. Interacts with with both Rad51 and Dss1(I) or both Dmc1 and Dss1(I) in a tripartite complex.;BRCA2-like B transcript=eq;prot=eq; - 5 No
BD2G03990 bdi BRCA2 pid=Bradi2g03990.1;tid=Bradi2g03990.1;GeneName=Bradi2g03990;Name=BdBRCA2A;transcript=eq;prot=eq - Bd2 No
CP00005G02230 cpa name=evm.TU.supercontig_5.223;pid=evm.TU.supercontig_5.223;prot=eq;transcript=eq - supercontig_5 No
CR13G01050 cre name=pasa_Sanger_mRNA9992;pid=413646;prot=eq;tid=400274;transcript=eq + chromosome_13 No
FV1G29750 fve Breast cancer type 2 susceptibility protein (probable) transcript=eq;prot=eq;pid=gene12352 - LG1 No
GM13G11750 gma 13 pid=16290325;transcript=eq;prot=eq;name=Glyma13g11750.1 + Gm13 No
LJ0G406250 lja prot=eq;transcript=eq;scaffold=CM1092;name=CM1092.240.nc - chr0 No
MD01G000980 mdo transcript=eq;prot=eq;pid=MDP0000868854;tid=MDP0000868854;contig=MDC010903.252 + 1 No
ME05375G00100 mes PACid=17964927;RNAname=cassava4.1_022518m;GeneName=cassava4.1_022518m.g;transcript=eq;prot=eq + scaffold05375 No
MRCC299_12G03850 mrcc299 name=EuGene.1200010130;pid=62958;prot=eq;tid=62958;transcript=eq + Chr_12 No
MT3G083250 mtr Breast cancer type 2 susceptibility protein (AHRD V1 *-*- P51587); contains Interpro domain(s) IPR015525 Breast cancer type 2 susceptibility protein transcript=eq;prot=eq;pid=Medtr3g083250.1; + 3 No
MT3G083260 mtr Breast cancer type 2 susceptibility protein homolog (AHRD V1 *-*- P97929); contains Interpro domain(s) IPR015525 Breast cancer type 2 susceptibility protein transcript=eq;prot=eq;pid=Medtr3g083260.1; + 3 No
MT6G036580 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr6g036580.1; - 6 Yes
OL11G00610 olu NULL name=eugene.1100010062,pid=26389,prot=eq,tid=26389 - Chr_11 No
OS01G07110 osa BRCA2 repeat family protein, expressed transcript=eq;prot=eq; - 1 No
OSINDICA_01G06540 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC000437; - Chr01 No
OT11G00620 ota name=OT11G00620;protein_id=CAL55667.1;prot=eq - chrom11 Yes
OT11G00640 ota breast cancer susceptibility protein 2 (ISS); name=OT11G00640;protein_id=CAL55669.1;prot=eq;partial=yes - chrom11 No
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