Gene family  

Sub-families
No subfamilies present
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
gma
Glycine max (3 genes)
lja
Lotus japonicus (4 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (2 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (2 genes)



The gene family HOM004015 has 34 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 34 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G18430 aly name=fgenesh2_kg.6__1848__AT5G18400.2;pid=488714;prot=eq;tid=488714 - scaffold_6 No
AT5G18362 ath Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF689 (InterPro:IPR007785); BEST Arabidopsis thaliana protein match is: Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis (TAIR:AT5G18400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis transcript=eq;prot=eq; - 5 No
AT5G18400 ath Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF689 (InterPro:IPR007785); BEST Arabidopsis thaliana protein match is: Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis (TAIR:AT5G18362.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis transcript=eq;prot=eq; - 5 No
BD1G25576 bdi pid=Bradi1g25576.1;tid=Bradi1g25576.1;GeneName=Bradi1g25576;transcript=eq;prot=eq - Bd1 No
BD5G25970 bdi pid=Bradi5g25970.1;tid=Bradi5g25970.1;GeneName=Bradi5g25970;transcript=eq;prot=eq + Bd5 No
CP00051G00420 cpa name=evm.TU.supercontig_51.42;pid=evm.TU.supercontig_51.42;prot=eq;transcript=eq - supercontig_51 No
GM00G00205 gma 42 pid=16242714;transcript=eq;prot=eq;name=Glyma0042s00440.1 + scaffold_42 No
GM11G10960 gma 11 pid=16283424;transcript=eq;prot=eq;name=Glyma11g10960.1 + Gm11 No
GM12G17560 gma 12 pid=16287777;transcript=eq;prot=eq;name=Glyma12g17560.1 - Gm12 No
LJ0G060720 lja prot=eq;transcript=eq;scaffold=LjSGA_021652;name=LjSGA_021652.1 + LjSGA_021652 No
LJ0G141460 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_044274;name=LjSGA_044274.1 - LjSGA_044274 No
LJ0G254060 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_084477;name=LjSGA_084477.0.1 - LjSGA_084477 No
LJ0G445780 lja partial;prot=eq;transcript=eq;scaffold=LjT32E09;name=LjT32E09.90.nd - chr0 No
ME07035G00900 mes PACid=17977200;RNAname=cassava4.1_029989m;GeneName=cassava4.1_029989m.g;transcript=eq;prot=eq - scaffold07035 No
ME08154G00090 mes PACid=17960134;RNAname=cassava4.1_013693m;GeneName=cassava4.1_013693m.g;transcript=eq;prot=eq - scaffold08154 No
MRCC299_10G02180 mrcc299 name=gw2.10.567.1;pid=74512;prot=eq;tid=74512;transcript=eq + Chr_10 No
MT4G074480 mtr Anamorsin homolog (AHRD V1 ***- B7FNA9); contains Interpro domain(s) IPR007785 Protein of unknown function DUF689 transcript=eq;prot=eq;pid=Medtr4g074480.1; + 4 No
MT4G108000 mtr U11/U12 small nuclear ribonucleoprotein 25 kDa protein (AHRD V1 *--- Q9BV90); contains Interpro domain(s) IPR007785 Protein of unknown function DUF689 transcript=eq;prot=eq;pid=Medtr4g108000.1; - 4 No
OL01G06080 olu NULL name=eugene.0100010613,pid=29219,prot=eq,tid=29219 + Chr_1 No
OS04G57810 osa GA18008%2DPA, putative, expressed transcript=eq;prot=eq; + 4 No
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