Gene family  

Sub-families
ORTHO004130 (28 genes in 22 species)
ORTHO036280 (3 genes in 3 species)
ORTHO047765 (2 genes in 2 species)
View all sub-families (3)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (3 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (3 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (3 genes)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM003994 has 34 genes in 22 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 34 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL8G23930 aly name=scaffold_802399.1;pid=918999;prot=eq;tid=950512 + scaffold_8 No
AT5G58100 ath unknown protein; INVOLVED IN: pollen exine formation; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). transcript=eq;prot=eq; + 5 No
BD3G43260 bdi pid=Bradi3g43260.1;tid=Bradi3g43260.1;GeneName=Bradi3g43260;transcript=eq;prot=eq + Bd3 No
CP00091G00700 cpa name=evm.TU.supercontig_91.70;pid=evm.TU.supercontig_91.70;prot=eq;transcript=eq + supercontig_91 No
CP00091G00710 cpa name=evm.TU.supercontig_91.71;pid=evm.TU.supercontig_91.71;prot=eq;transcript=eq + supercontig_91 No
CP00091G00720 cpa name=evm.TU.supercontig_91.72;pid=evm.TU.supercontig_91.72;prot=eq;transcript=eq + supercontig_91 No
CR16G06820 cre name=pasa_Sanger_mRNA15743;pid=397552;prot=eq;tid=406072;transcript=eq - chromosome_16 No
FV4G00570 fve DNA repair and recombination protein rti1 (probable) transcript=eq;prot=eq;pid=gene11482 - LG4 No
GM01G00380 gma 01 pid=16242901;transcript=eq;prot=eq;name=Glyma01g00380.1 + Gm01 No
GM08G47480 gma 08 pid=16274162;transcript=eq;prot=eq;name=Glyma08g47480.1 + Gm08 No
LJ0G405660 lja partial;prot=eq;transcript=eq;scaffold=CM0300;name=CM0300.50.nc - chr0 No
LJ2G009510 lja partial;prot=eq;transcript=eq;scaffold=CM0373;name=chr2.CM0373.820.nc - chr2 No
MD14G018840 mdo transcript=eq;prot=eq;pid=MDP0000260850;tid=MDP0000260850;contig=MDC018412.99 - 14 No
ME03221G00060 mes PACid=17976946;RNAname=cassava4.1_013760m;GeneName=cassava4.1_013760m.g;transcript=eq;prot=eq - scaffold03221 No
ME03221G00070 mes PACid=17976947;RNAname=cassava4.1_018203m;GeneName=cassava4.1_018203m.g;transcript=eq;prot=eq - scaffold03221 No
ME03221G00080 mes PACid=17976944;RNAname=cassava4.1_007236m;GeneName=cassava4.1_007236m.g;transcript=eq;prot=eq - scaffold03221 No
MRCC299_16G01550 mrcc299 name=EuGene.1600010155;pid=64794;prot=eq;tid=64794;transcript=eq - Chr_16 No
MT5G019500 mtr Genomic DNA chromosome 5 TAC clone K21L19 (AHRD V1 *-*- Q9FGT4_ARATH) transcript=eq;prot=eq;pid=Medtr5g019500.2; + 5 No
MT7G052650 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr7g052650.1; - 7 Yes
OS02G26984 osa expressed protein transcript=eq;prot=eq; + 2 No
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