Gene family  

Sub-families
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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (3 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (5 genes)



The gene family HOM003985 has 34 genes in 23 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 34 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL5G21830 aly name=scaffold_502273.1;pid=906569;prot=eq;tid=938082 - scaffold_5 No
AT3G52090 ath Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB11 and the E. oli RNA polymerase alpha subunit.;DNA-directed RNA polymerase, RBP11-like transcript=eq;prot=eq; - 3 No
BD1G54490 bdi DNA-directed RNA polymerase activity (Blast2GO) pid=Bradi1g54490.2;tid=Bradi1g54490.2;GeneName=Bradi1g54490;transcript=eq;prot=eq + Bd1 No
BD4G33980 bdi DNA-directed RNA polymerase activity (Blast2GO) pid=Bradi4g33980.3;tid=Bradi4g33980.3;GeneName=Bradi4g33980;transcript=eq;prot=eq - Bd4 No
CP00125G00240 cpa name=evm.TU.supercontig_125.24;pid=evm.TU.supercontig_125.24;prot=eq;transcript=eq - supercontig_125 No
CR13G00760 cre name=estExt_fgenesh2_kg.C_20015;pid=182662;prot=eq;tid=182662;transcript=eq - chromosome_13 No
FV2G02350 fve DNA-directed RNA polymerase II subunit RPB11 (RNA polymerase II subunit B11) transcript=eq;prot=eq;pid=gene19664 + LG2 No
GM06G21440 gma 06 pid=16263719;transcript=eq;prot=eq;name=Glyma06g21440.1 - Gm06 No
GM09G36280 gma 09 pid=16277384;transcript=eq;prot=eq;name=Glyma09g36280.1 - Gm09 No
GM12G01050 gma 12 pid=16285921;transcript=eq;prot=eq;name=Glyma12g01050.1 + Gm12 No
LJ3G037010 lja prot=eq;transcript=eq;scaffold=CM0261;name=chr3.CM0261.140.nc + chr3 No
MD12G006900 mdo transcript=eq;prot=eq;pid=MDP0000216071;tid=MDP0000216071;contig=MDC022363.241 - 12 No
ME06659G00130 mes PACid=17993952;RNAname=cassava4.1_019523m;GeneName=cassava4.1_019523m.g;transcript=eq;prot=eq + scaffold06659 No
ME11106G00610 mes PACid=17986769;RNAname=cassava4.1_019519m;GeneName=cassava4.1_019519m.g;transcript=eq;prot=eq + scaffold11106 No
MRCC299_07G03010 mrcc299 name=gw2.07.618.1;pid=76999;prot=eq;tid=76999;transcript=eq - Chr_07 No
OL07G02210 olu NULL name=e_gwEuk.7.504.1,pid=35735,prot=eq,tid=35735 + Chr_7 No
OS07G07610 osa RNA polymerase subunit, putative, expressed transcript=eq;prot=eq; - 7 No
OSINDICA_07G05950 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC022700; - Chr07 No
OT01G00910 ota RPB11_CAEEL Probable DNA-directed RNA polymerase II 13.3 kDa polypeptide (ISS); name=OT01G00910;protein_id=CAL50002.1;prot=eq + chrom01 No
PP00007G00190 ppa NULL name=estExt_gwp_gw1.C_70021,pid=174357,prot=eq,tid=174357 - scaffold_7 No
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