Gene family  

Sub-families
ORTHO003031 (30 genes in 24 species)
ORTHO061388 (2 genes in 2 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (3 genes)
osaindica
Oryza sativa ssp. indica (5 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM003967 has 34 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 34 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G35230 aly name=scaffold_303747.1;pid=899777;prot=eq;tid=931290 + scaffold_3 No
AT2G15620 ath Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.;nitrite reductase 1 transcript=eq;prot=eq; + 2 No
BD3G57990 bdi pid=Bradi3g57990.1;tid=Bradi3g57990.1;GeneName=Bradi3g57990;transcript=eq;prot=eq + Bd3 No
CP00062G00080 cpa name=evm.TU.supercontig_62.8;pid=evm.TU.supercontig_62.8;prot=eq;transcript=eq + supercontig_62 No
CR09G05120 cre name=estExt_fgenesh2_pg.C_300056;pid=192085;prot=eq;tid=192085;transcript=eq - chromosome_9 No
FV3G32960 fve Ferredoxin--nitrite reductase, chloroplastic, Precursor (putative) transcript=eq;prot=eq;pid=gene28260 + LG3 No
GM02G14910 gma 02 pid=16248104;transcript=eq;prot=eq;name=Glyma02g14910.1 + Gm02 No
GM07G33570 gma 07 pid=16268612;transcript=eq;prot=eq;name=Glyma07g33570.1 - Gm07 No
LJ4G008370 lja prot=eq;transcript=eq;scaffold=CM0227;name=chr4.CM0227.280.nd - chr4 No
MD05G023750 mdo transcript=eq;prot=eq;pid=MDP0000722117;tid=MDP0000722117;contig=MDC002248.202 + 5 No
ME11866G00010 mes PACid=17970826;RNAname=cassava4.1_004233m;GeneName=cassava4.1_004233m.g;transcript=eq;prot=eq - scaffold11866 No
MRCC299_01G02120 mrcc299 name=PierreAnnot2.00058;pid=113259;prot=eq;tid=113259;transcript=eq - Chr_01 No
MT4G086020 mtr Ferredoxin-nitrite reductase (AHRD V1 ***- Q9FY16_LOTJA); contains Interpro domain(s) IPR006067 Nitrite and sulphite reductase 4Fe-4S region transcript=eq;prot=eq;pid=Medtr4g086020.1; + 4 No
OL10G00960 olu NULL name=estExt_Genewise_ext.C_Chr_100479,pid=50765,prot=eq,tid=50765 + Chr_10 No
OS01G25484 osa ferredoxin%2D%2Dnitrite reductase, putative, expressed transcript=eq;prot=eq; + 1 No
OS01G25520 osa ferredoxin%2Dnitrite reductase, putative transcript=eq;prot=eq; + 1 No
OS02G52730 osa ferredoxin%2D%2Dnitrite reductase, putative, expressed transcript=eq;prot=eq; - 2 No
OSINDICA_01G24600 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC001661; + Chr01 No
OSINDICA_01G24640 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC001665; + Chr01 No
OSINDICA_01G24650 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC001666; + Chr01 No
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