Gene family  

Sub-families
ORTHO004051 (28 genes in 20 species)
ORTHO048505 (2 genes in 2 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (5 genes)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM003940 has 34 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 34 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL7G03180 aly name=scaffold_700334.1;pid=912592;prot=eq;tid=944105 + scaffold_7 No
AT4G37460 ath Encodes a tetratricopeptide repeat domain containing protein that shows sequence similarity to those of transcriptional repressors in other organisms.Involved in mediating effector-triggered immunity.;Tetratricopeptide repeat (TPR)-like superfamily protein transcript=eq;prot=eq; - 4 No
BD1G59030 bdi acetylglucosaminyltransferase activity (Blast2GO) pid=Bradi1g59030.1;tid=Bradi1g59030.1;GeneName=Bradi1g59030;transcript=eq;prot=eq + Bd1 No
CP00006G00600 cpa name=evm.TU.supercontig_6.61;pid=evm.TU.supercontig_6.61;prot=eq;transcript=eq + supercontig_6 No
CP01082G00010 cpa name=evm.TU.supercontig_1082.1;pid=evm.TU.supercontig_1082.1;prot=eq;transcript=eq + supercontig_1082 No
CR01G04620 cre name=Chlre2_kg.scaffold_1000195;pid=146371;prot=eq;tid=146371;transcript=eq + chromosome_1 No
CR02G04520 cre name=au.g8698_t1;pid=290696;prot=eq;tid=290703;transcript=eq - chromosome_2 No
FV1G17150 fve Tetratricopeptide repeat protein 13 (TPR repeat protein 13) (probable) transcript=eq;prot=eq;pid=gene23993 + LG1 No
GM01G39830 gma 01 pid=16245757;transcript=eq;prot=eq;name=Glyma01g39830.1 - Gm01 No
GM05G21880 gma 05 pid=16259239;transcript=eq;prot=eq;name=Glyma05g21880.1 - Gm05 No
GM11G05450 gma 11 pid=16282782;transcript=eq;prot=eq;name=Glyma11g05450.1 + Gm11 No
GM17G17920 gma 17 pid=16305965;transcript=eq;prot=eq;name=Glyma17g17920.1 + Gm17 No
LJ0G051960 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_019495;name=LjSGA_019495.1 + LjSGA_019495 No
LJ0G125090 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_039326;name=LjSGA_039326.1 + LjSGA_039326 No
LJ0G150410 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_047214;name=LjSGA_047214.1 - LjSGA_047214 No
LJ0G156820 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_049180;name=LjSGA_049180.1 + LjSGA_049180 No
LJ0G185480 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_058836;name=LjSGA_058836.1 + LjSGA_058836 No
MD00G055880 mdo transcript=eq;prot=eq;pid=MDP0000595081;tid=MDP0000595081;contig=MDC002329.256 - MDC002329.256 No
MD02G016070 mdo transcript=eq;prot=eq;pid=MDP0000166922;tid=MDP0000166922;contig=MDC004857.120 - 2 No
MD15G023170 mdo transcript=eq;prot=eq;pid=MDP0000161194;tid=MDP0000161194;contig=MDC001234.235 - 15 No
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