Gene family  

Sub-families
No subfamilies present
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (3 genes)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family HOM003862 has 35 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 35 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G01490 aly name=scaffold_200152.1;pid=893078;prot=eq;tid=924591 + scaffold_2 No
AT1G63660 ath GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity, catalytic activity, GMP synthase (glutamine-hydrolyzing) activity, ATP binding; INVOLVED IN: in 7 processes; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), GMP synthase, N-terminal (InterPro:IPR004739), GMP synthase, C-terminal (InterPro:IPR001674), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamine amidotransferase type 1 (InterPro:IPR017926), Asparagine synthase (InterPro:IPR001962), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); Has 20887 Blast hits to 20751 proteins in 2946 species: Archae - 738; Bacteria - 12164; Metazoa - 273; Fungi - 298; Plants - 185; Viruses - 0; Other Eukaryotes - 7229 (source: NCBI BLink).;GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative transcript=eq;prot=eq; - 1 No
BD3G20590 bdi tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity (Blast2GO) pid=Bradi3g20590.1;tid=Bradi3g20590.1;GeneName=Bradi3g20590;transcript=eq;prot=eq - Bd3 No
CP00074G00570 cpa name=evm.TU.supercontig_74.57;pid=evm.TU.supercontig_74.57;prot=eq;transcript=eq - supercontig_74 No
CP40776G00010 cpa name=evm.TU.contig_40776.1;pid=evm.TU.contig_40776.1;prot=eq;transcript=eq - contig_40776 No
CR02G04100 cre name=estExt_gwp_1H.C_70149;pid=126329;prot=eq;tid=126329;transcript=eq - chromosome_2 No
FV5G26610 fve GMP synthase [glutamine-hydrolyzing] (putative) transcript=eq;prot=eq;pid=gene29092 + LG5 No
GM05G37760 gma 05 pid=16261056;transcript=eq;prot=eq;name=Glyma05g37760.1 - Gm05 No
GM08G01820 gma 08 pid=16269616;transcript=eq;prot=eq;name=Glyma08g01820.1 + Gm08 No
LJ0G044350 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_017583;name=LjSGA_017583.1 - LjSGA_017583 No
LJ0G045670 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_017911;name=LjSGA_017911.1 + LjSGA_017911 No
MD00G182350 mdo transcript=eq;prot=eq;pid=MDP0000930760;tid=MDP0000930760;contig=MDC007831.409 - MDC007831.409 No
MD00G448960 mdo transcript=eq;prot=eq;pid=MDP0000313594;tid=MDP0000313594;contig=MDC020634.215 + MDC020634.215 No
ME05280G00480 mes PACid=17970961;RNAname=cassava4.1_011019m;GeneName=cassava4.1_011019m.g;transcript=eq;prot=eq + scaffold05280 No
ME11069G00570 mes PACid=17980451;RNAname=cassava4.1_008456m;GeneName=cassava4.1_008456m.g;transcript=eq;prot=eq - scaffold11069 No
MRCC299_15G02270 mrcc299 name=EuGene.1500010225;pid=64504;prot=eq;tid=64504;transcript=eq - Chr_15 No
OL15G01020 olu NULL name=eugene.1500010100,pid=27778,prot=eq,tid=27778 - Chr_15 No
OS08G23730 osa class I glutamine amidotransferase, putative, expressed transcript=eq;prot=eq; + 8 No
OSINDICA_00G16460 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFSC046596; - Scaffold010868 No
OSINDICA_08G22150 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC026254; + Chr08 No
<< previous
1 | 2 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier