Gene family  

Sub-families
No subfamilies present
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (2 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (4 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (5 genes)
zma
Zea mays (2 genes)



The gene family HOM003835 has 35 genes in 19 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 35 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G17770 aly name=Al_scaffold_0003_1738;pid=873097;prot=eq;tid=904610 - scaffold_3 No
AL3G18660 aly name=scaffold_302041.1;pid=898071;prot=eq;tid=929584 - scaffold_3 No
AL3G18670 aly name=scaffold_302042.1;pid=898072;prot=eq;tid=929585 - scaffold_3 Yes
AT3G17340 ath ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2).;ARM repeat superfamily protein transcript=eq;prot=eq; - 3 No
BD1G78826 bdi pid=Bradi1g78826.1;tid=Bradi1g78826.1;GeneName=Bradi1g78826;transcript=eq;prot=eq - Bd1 No
BD4G09810 bdi pid=Bradi4g09810.1;tid=Bradi4g09810.1;GeneName=Bradi4g09810;transcript=eq;prot=eq + Bd4 No
CP00146G00470 cpa name=evm.TU.supercontig_146.47;pid=evm.TU.supercontig_146.47;prot=eq;transcript=eq + supercontig_146 No
FV3G38200 fve Pectinesterase inhibitor (PMEI), Precursor (probable) transcript=eq;prot=eq;pid=gene05013 + LG3 No
FV4G19320 fve Transportin-1 (probable) transcript=eq;prot=eq;pid=gene22994 + LG4 No
GM07G36120 gma 07 pid=16268885;transcript=eq;prot=eq;name=Glyma07g36120.1 - Gm07 No
GM17G04280 gma 17 pid=16304367;transcript=eq;prot=eq;name=Glyma17g04280.1 - Gm17 No
ME01551G04770 mes PACid=17961754;RNAname=cassava4.1_001545m;GeneName=cassava4.1_001545m.g;transcript=ne;prot=eq + scaffold01551 No
MRCC299_12G02860 mrcc299 name=EuGene.1200010231;pid=63059;prot=eq;tid=63059;transcript=eq - Chr_12 No
MT4G123520 mtr Genomic DNA chromosome 3 P1 clone MGD8 (AHRD V1 *-*- Q9LUT8_ARATH); contains Interpro domain(s) IPR016024 Armadillo-type fold transcript=eq;prot=eq;pid=Medtr4g123520.1; - 4 No
MT4G123540 mtr Genomic DNA chromosome 3 P1 clone MGD8 (AHRD V1 *-*- Q9LUT7_ARATH); contains Interpro domain(s) IPR016024 Armadillo-type fold transcript=eq;prot=eq;pid=Medtr4g123540.1; - 4 No
MT4G123670 mtr Genomic DNA chromosome 3 P1 clone MGD8 (AHRD V1 ***- Q9LUT8_ARATH); contains Interpro domain(s) IPR016024 Armadillo-type fold transcript=eq;prot=eq;pid=Medtr4g123670.1; - 4 No
MT4G123690 mtr Genomic DNA chromosome 3 P1 clone MGD8 (AHRD V1 *-*- Q9LUT7_ARATH); contains Interpro domain(s) IPR011989 Armadillo-like helical transcript=eq;prot=eq;pid=Medtr4g123690.1; - 4 No
OS11G47130 osa protein transporter, putative, expressed transcript=eq;prot=eq; + 11 No
OS11G47320 osa protein transporter, putative, expressed transcript=eq;prot=eq; - 11 No
OSINDICA_11G33570 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC036059; - Chr11 No
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