Gene family 
- Id
- HOM003779
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO003413 (29 genes in 24 species)
ORTHO048690 (2 genes in 2 species)
View all sub-families (2)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (1 gene)
- ath
- Arabidopsis thaliana (1 gene)
- bdi
- Brachypodium distachyon (3 genes)
- cpa
- Carica papaya (1 gene)
- cre
- Chlamydomonas reinhardtii (2 genes)
- fve
- Fragaria vesca (2 genes)
- gma
- Glycine max (4 genes)
- lja
- Lotus japonicus (1 gene)
- mdo
- Malus domestica (2 genes)
- mes
- Manihot esculenta (1 gene)
- mrcc299
- Micromonas sp. RCC299 (1 gene)
- mtr
- Medicago truncatula (1 gene)
- olu
- Ostreococcus lucimarinus (1 gene)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (1 gene)
- ota
- Ostreococcus tauri (1 gene)
- ppa
- Physcomitrella patens (2 genes)
- ptr
- Populus trichocarpa (2 genes)
- rco
- Ricinus communis (1 gene)
- sbi
- Sorghum bicolor (1 gene)
- tca
- Theobroma cacao (1 gene)
- vca
- Volvox carteri (2 genes)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (2 genes)
The gene family HOM003779 has 36 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM003779
Page 1 of 2, showing 20 records out of 36 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL3G22140 | aly | name=scaffold_302415.1;pid=898445;prot=eq;tid=929958 | - | scaffold_3 | No | |
| AT3G20320 | ath | Encodes a permease-like component of an ABC transporter involved in lipid transfer from ER to chloroplast. A phosphatidic acid-binding protein with a predicted mycobacterial cell entry domain. It is tethered to the inner chloroplast envelope membrane facing the outer envelope membrane. Presumed bacterial orthologs of TGD1 and TGD2 in Gram-negative bacteria are typically organized in transcriptional units, suggesting their involvement in a common biological process. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.;trigalactosyldiacylglycerol2 | transcript=eq;prot=eq; | - | 3 | No |
| BD1G62900 | bdi | pid=Bradi1g62900.1;tid=Bradi1g62900.1;GeneName=Bradi1g62900;transcript=eq;prot=eq | - | Bd1 | No | |
| BD2G36320 | bdi | pid=Bradi2g36320.1;tid=Bradi2g36320.1;GeneName=Bradi2g36320;transcript=eq;prot=eq | + | Bd2 | No | |
| BD3G43010 | bdi | pid=Bradi3g43010.1;tid=Bradi3g43010.1;GeneName=Bradi3g43010;transcript=eq;prot=eq | + | Bd3 | No | |
| CP39485G00010 | cpa | name=evm.TU.contig_39485.1;pid=evm.TU.contig_39485.1;prot=eq;transcript=eq | - | contig_39485 | No | |
| CR02G12540 | cre | name=pasa_Sanger_mRNA21155;pid=414024;prot=eq;tid=411552;transcript=eq | - | chromosome_2 | No | |
| CR16G09710 | cre | name=au.g6938_t1;pid=288795;prot=eq;tid=288802;transcript=eq | + | chromosome_16 | No | |
| FV7G03740 | fve | Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic (ABC transporter ABCI.15), Precursor (similar to) | transcript=eq;prot=eq;pid=gene18565 | + | LG7 | No |
| FV7G03750 | fve | Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic (ABC transporter ABCI.15), Precursor (similar to) | transcript=eq;prot=eq;pid=gene18566 | + | LG7 | No |
| GM02G44370 | gma | 02 | pid=16250140;transcript=eq;prot=eq;name=Glyma02g44370.1 | - | Gm02 | No |
| GM13G03930 | gma | 13 | pid=16289575;transcript=eq;prot=eq;name=Glyma13g03930.1 | - | Gm13 | No |
| GM14G04440 | gma | 14 | pid=16294336;transcript=eq;prot=eq;name=Glyma14g04440.1 | + | Gm14 | No |
| GM20G10880 | gma | 20 | pid=16315813;transcript=eq;prot=eq;name=Glyma20g10880.1 | - | Gm20 | No |
| LJ0G376220 | lja | partial;prot=eq;transcript=eq;scaffold=LjSGA_136197;name=LjSGA_136197.1 | + | LjSGA_136197 | No | |
| MD00G180940 | mdo | transcript=eq;prot=eq;pid=MDP0000485181;tid=MDP0000485181;contig=MDC007758.239 | - | MDC007758.239 | No | |
| MD04G000750 | mdo | transcript=eq;prot=eq;pid=MDP0000356050;tid=MDP0000356050;contig=MDC021502.278 | + | 4 | No | |
| ME06155G00030 | mes | PACid=17967107;RNAname=cassava4.1_009577m;GeneName=cassava4.1_009577m.g;transcript=eq;prot=eq | + | scaffold06155 | No | |
| MRCC299_04G05350 | mrcc299 | name=e_gw2.04.496.1;pid=81155;prot=eq;tid=81155;transcript=eq | - | Chr_04 | No | |
| MT5G088340 | mtr | ABC-type transport system involved in resistance to organic solvents periplasmic component (AHRD V1 ***- B6U6V2_MAIZE); contains Interpro domain(s) IPR003399 Mammalian cell entry related | transcript=eq;prot=eq;pid=Medtr5g088340.1; | - | 5 | No |