Gene family  

Sub-families
ORTHO003413 (29 genes in 24 species)
ORTHO048690 (2 genes in 2 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (3 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (4 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM003779 has 36 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 36 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G22140 aly name=scaffold_302415.1;pid=898445;prot=eq;tid=929958 - scaffold_3 No
AT3G20320 ath Encodes a permease-like component of an ABC transporter involved in lipid transfer from ER to chloroplast. A phosphatidic acid-binding protein with a predicted mycobacterial cell entry domain. It is tethered to the inner chloroplast envelope membrane facing the outer envelope membrane. Presumed bacterial orthologs of TGD1 and TGD2 in Gram-negative bacteria are typically organized in transcriptional units, suggesting their involvement in a common biological process. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.;trigalactosyldiacylglycerol2 transcript=eq;prot=eq; - 3 No
BD1G62900 bdi pid=Bradi1g62900.1;tid=Bradi1g62900.1;GeneName=Bradi1g62900;transcript=eq;prot=eq - Bd1 No
BD2G36320 bdi pid=Bradi2g36320.1;tid=Bradi2g36320.1;GeneName=Bradi2g36320;transcript=eq;prot=eq + Bd2 No
BD3G43010 bdi pid=Bradi3g43010.1;tid=Bradi3g43010.1;GeneName=Bradi3g43010;transcript=eq;prot=eq + Bd3 No
CP39485G00010 cpa name=evm.TU.contig_39485.1;pid=evm.TU.contig_39485.1;prot=eq;transcript=eq - contig_39485 No
CR02G12540 cre name=pasa_Sanger_mRNA21155;pid=414024;prot=eq;tid=411552;transcript=eq - chromosome_2 No
CR16G09710 cre name=au.g6938_t1;pid=288795;prot=eq;tid=288802;transcript=eq + chromosome_16 No
FV7G03740 fve Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic (ABC transporter ABCI.15), Precursor (similar to) transcript=eq;prot=eq;pid=gene18565 + LG7 No
FV7G03750 fve Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic (ABC transporter ABCI.15), Precursor (similar to) transcript=eq;prot=eq;pid=gene18566 + LG7 No
GM02G44370 gma 02 pid=16250140;transcript=eq;prot=eq;name=Glyma02g44370.1 - Gm02 No
GM13G03930 gma 13 pid=16289575;transcript=eq;prot=eq;name=Glyma13g03930.1 - Gm13 No
GM14G04440 gma 14 pid=16294336;transcript=eq;prot=eq;name=Glyma14g04440.1 + Gm14 No
GM20G10880 gma 20 pid=16315813;transcript=eq;prot=eq;name=Glyma20g10880.1 - Gm20 No
LJ0G376220 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_136197;name=LjSGA_136197.1 + LjSGA_136197 No
MD00G180940 mdo transcript=eq;prot=eq;pid=MDP0000485181;tid=MDP0000485181;contig=MDC007758.239 - MDC007758.239 No
MD04G000750 mdo transcript=eq;prot=eq;pid=MDP0000356050;tid=MDP0000356050;contig=MDC021502.278 + 4 No
ME06155G00030 mes PACid=17967107;RNAname=cassava4.1_009577m;GeneName=cassava4.1_009577m.g;transcript=eq;prot=eq + scaffold06155 No
MRCC299_04G05350 mrcc299 name=e_gw2.04.496.1;pid=81155;prot=eq;tid=81155;transcript=eq - Chr_04 No
MT5G088340 mtr ABC-type transport system involved in resistance to organic solvents periplasmic component (AHRD V1 ***- B6U6V2_MAIZE); contains Interpro domain(s) IPR003399 Mammalian cell entry related transcript=eq;prot=eq;pid=Medtr5g088340.1; - 5 No
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