Gene family  

Sub-families
ORTHO028054 (4 genes in 2 species)
ORTHO038527 (3 genes in 3 species)
ORTHO043452 (2 genes in 1 species)
View all sub-families (4)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (5 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (3 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (3 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (2 genes)
zma
Zea mays (2 genes)



The gene family HOM003718 has 36 genes in 16 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 36 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G00260 aly name=Al_scaffold_0009_26;pid=883544;prot=eq;tid=915057 + scaffold_9 Yes
AL1G07110 aly name=scaffold_100757.1;pid=887963;prot=eq;tid=919476 - scaffold_1 No
AL3G31410 aly name=scaffold_303355.1;pid=899385;prot=eq;tid=930898 - scaffold_3 No
AL6G01360 aly name=fgenesh2_kg.6__133__AT5G02220.1;pid=486999;prot=eq;tid=486999 - scaffold_6 No
AL8G13670 aly name=scaffold_801377.1;pid=917977;prot=eq;tid=949490 - scaffold_8 No
AT5G02220 ath unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). transcript=eq;prot=eq; - 5 No
BD2G54730 bdi pid=Bradi2g54730.1;tid=Bradi2g54730.1;GeneName=Bradi2g54730;transcript=eq;prot=eq + Bd2 No
CP00081G01200 cpa name=evm.TU.supercontig_81.120;pid=evm.TU.supercontig_81.120;prot=eq;transcript=eq - supercontig_81 No
CP34680G00010 cpa name=evm.TU.contig_34680.1;pid=evm.TU.contig_34680.1;prot=eq;transcript=eq - contig_34680 No
FV3G29100 fve hypothetical protein transcript=eq;prot=eq;pid=gene30192 + LG3 Yes
FV6G12750 fve Zinc finger FYVE domain-containing protein 27 (probable) transcript=eq;prot=eq;pid=gene18441 - LG6 No
GM02G41620 gma 02 pid=16249816;transcript=eq;prot=eq;name=Glyma02g41620.1 + Gm02 No
GM07G16050 gma 07 pid=16267445;transcript=eq;prot=eq;name=Glyma07g16050.1 + Gm07 No
GM14G07330 gma 14 pid=16294693;transcript=eq;prot=eq;name=Glyma14g07330.1 - Gm14 No
MD04G009900 mdo transcript=eq;prot=eq;pid=MDP0000308034;tid=MDP0000308034;contig=MDC016775.162 + 4 No
ME06705G00050 mes PACid=17989502;RNAname=cassava4.1_031317m;GeneName=cassava4.1_031317m.g;transcript=eq;prot=eq - scaffold06705 No
ME08265G02210 mes PACid=17988745;RNAname=cassava4.1_028505m;GeneName=cassava4.1_028505m.g;transcript=eq;prot=eq + scaffold08265 No
ME08368G00050 mes PACid=17977562;RNAname=cassava4.1_029378m;GeneName=cassava4.1_029378m.g;transcript=eq;prot=eq + scaffold08368 No
MT5G080040 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr5g080040.1; + 5 No
MT5G080060 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr5g080060.1; + 5 No
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