Gene family  

Sub-families
ORTHO004720 (27 genes in 18 species)
ORTHO034702 (3 genes in 3 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




ath
Arabidopsis thaliana (2 genes)
cre
Chlamydomonas reinhardtii (1 gene)
gma
Glycine max (3 genes)
lja
Lotus japonicus (4 genes)
mdo
Malus domestica (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (2 genes)
ppa
Physcomitrella patens (1 gene)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (4 genes)
zma
Zea mays (5 genes)



The gene family HOM003678 has 36 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 36 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AT2G07727 ath Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal; FUNCTIONS IN: electron carrier activity, oxidoreductase activity; INVOLVED IN: respiratory electron transport chain; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6, C-terminal (InterPro:IPR005798), Cytochrome b/b6 (InterPro:IPR016175), Di-haem cytochrome, transmembrane (InterPro:IPR016174), Cytochrome b/b6, N-terminal (InterPro:IPR005797); BEST Arabidopsis thaliana protein match is: apocytochrome b (TAIR:ATMG00220.1); Has 180948 Blast hits to 180662 proteins in 32826 species: Archae - 150; Bacteria - 2756; Metazoa - 167905; Fungi - 1359; Plants - 1860; Viruses - 0; Other Eukaryotes - 6918 (source: NCBI BLink).;Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal transcript=eq;prot=eq; + 2 No
ATMG00220 ath Mitochondrial apocytochrome b (cob) gene encodes a subunit of the ubiquinol-cytochrome c oxidoreductase and is part of a 5 kb transcript. The transcript also contains a pseudogene for ribosomal protein S14 called RPS15 and a tRNA(Ser) gene. Both the Cob and RPS15 genes are edited in the transcript.;apocytochrome b transcript=eq;prot=eq; + mitochondrial No
CRMG00100 cre cob;apocytochrome b;protein_id=AAC39350.1; + mitochondrial No
GM00G00730 gma 405 pid=16254287;transcript=eq;prot=eq;name=Glyma0405s00200.1 - scaffold_405 No
GM05G18370 gma 05 pid=16259081;transcript=eq;prot=eq;name=Glyma05g18370.1 + Gm05 No
GM07G12630 gma 07 pid=16267086;transcript=eq;prot=eq;name=Glyma07g12630.1 - Gm07 No
LJ0G003040 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_003899;name=LjSGA_003899.1 + LjSGA_003899 No
LJ0G003050 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_003900;name=LjSGA_003900.1 + LjSGA_003900 No
LJ0G031600 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_014544;name=LjSGA_014544.2.1 - LjSGA_014544 No
LJ4G012810 lja partial;prot=eq;transcript=eq;scaffold=CM0131;name=chr4.CM0131.460.nd + chr4 No
MD00G116520 mdo transcript=eq;prot=eq;pid=MDP0000800216;tid=MDP0000800216;contig=MDC004970.368 - MDC004970.368 No
MD00G412300 mdo transcript=eq;prot=eq;pid=MDP0000758416;tid=MDP0000758416;contig=MDC018770.180 - MDC018770.180 No
MRCC299_MG00300 mrcc299 cob;apocytochrome B;protein_id=ACO55597.1; - mitochondrial No
MT1G006200 mtr Cytochrome b (Fragment) (AHRD V1 ***- Q9T5A4_SOLTU); contains Interpro domain(s) IPR016175 Cytochrome b/b6 transcript=eq;prot=eq;pid=Medtr1g006200.1; + 1 No
MT5G020030 mtr Cytochrome b (Fragment) (AHRD V1 *-*- A7J1B4_CALOL); contains Interpro domain(s) IPR016175 Cytochrome b/b6 transcript=eq;prot=eq;pid=Medtr5g020030.1; - 5 No
OSINDICA_MG00600 osaindica cob;apocytochrome b;protein_id=AAZ99245.1; - mitochondrial No
OSMG00590 osa cob;apocytochrome b;protein_id=AAZ99352.1; - mitochondrial No
OTMG00440 ota protein_id=CAL36412.2; cob_1; + mitochondrial No
OTMG00640 ota protein_id=CAL36424.2; cob_2; - mitochondrial No
PPMG00500 ppa cob;cytochrome b;protein_id=BAE93098.1; transl_table=1; + mitochondrial No
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