Gene family 
- Id
- HOM003514
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO002481 (32 genes in 19 species)
ORTHO044640 (2 genes in 2 species)
View all sub-families (2)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (2 genes)
- ath
- Arabidopsis thaliana (2 genes)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (1 gene)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (5 genes)
- lja
- Lotus japonicus (4 genes)
- mdo
- Malus domestica (2 genes)
- mes
- Manihot esculenta (2 genes)
- mtr
- Medicago truncatula (2 genes)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (1 gene)
- ppa
- Physcomitrella patens (6 genes)
- ptr
- Populus trichocarpa (2 genes)
- rco
- Ricinus communis (1 gene)
- sbi
- Sorghum bicolor (1 gene)
- tca
- Theobroma cacao (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (2 genes)
The gene family HOM003514 has 38 genes in 19 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM003514
Page 1 of 2, showing 20 records out of 38 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL4G26640 | aly | name=fgenesh2_kg.4__2100__AT2G40000.1;pid=483040;prot=eq;tid=483040 | - | scaffold_4 | No | |
| AL5G26040 | aly | name=fgenesh2_kg.5__2018__AT3G55840.1;pid=486026;prot=eq;tid=486026 | - | scaffold_5 | No | |
| AT2G40000 | ath | ortholog of sugar beet HS1 PRO-1 2 (HSPRO2); CONTAINS InterPro DOMAIN/s: Hs1pro-1, C-terminal (InterPro:IPR009743), Hs1pro-1, N-terminal (InterPro:IPR009869); BEST Arabidopsis thaliana protein match is: Hs1pro-1 protein (TAIR:AT3G55840.1); Has 71 Blast hits to 71 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).;ortholog of sugar beet HS1 PRO-1 2 | transcript=eq;prot=eq; | - | 2 | No |
| AT3G55840 | ath | Hs1pro-1 protein; CONTAINS InterPro DOMAIN/s: Hs1pro-1, C-terminal (InterPro:IPR009743), Hs1pro-1, N-terminal (InterPro:IPR009869); BEST Arabidopsis thaliana protein match is: ortholog of sugar beet HS1 PRO-1 2 (TAIR:AT2G40000.1); Has 60 Blast hits to 60 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Hs1pro-1 protein | transcript=eq;prot=eq; | - | 3 | No |
| BD2G55310 | bdi | pid=Bradi2g55310.1;tid=Bradi2g55310.1;GeneName=Bradi2g55310;transcript=eq;prot=eq | - | Bd2 | No | |
| CP00019G02030 | cpa | name=evm.TU.supercontig_19.204;pid=evm.TU.supercontig_19.204;prot=eq;transcript=eq | - | supercontig_19 | No | |
| FV7G29070 | fve | Actin cytoskeleton-regulatory complex protein pan1 (probable) | transcript=eq;prot=eq;pid=gene20931 | - | LG7 | No |
| GM02G42250 | gma | 02 | pid=16249890;transcript=eq;prot=eq;name=Glyma02g42250.1 | - | Gm02 | No |
| GM11G35050 | gma | 11 | pid=16285433;transcript=eq;prot=eq;name=Glyma11g35050.1 | - | Gm11 | No |
| GM14G06640 | gma | 14 | pid=16294599;transcript=eq;prot=eq;name=Glyma14g06640.1 | + | Gm14 | No |
| GM17G15360 | gma | 17 | pid=16305670;transcript=eq;prot=eq;name=Glyma17g15360.1 | + | Gm17 | No |
| GM18G03310 | gma | 18 | pid=16307787;transcript=eq;prot=eq;name=Glyma18g03310.1 | + | Gm18 | No |
| LJ0G431810 | lja | partial;prot=eq;transcript=eq;scaffold=LjT13K07;name=LjT13K07.110.nd | + | chr0 | No | |
| LJ2G033860 | lja | prot=eq;transcript=eq;scaffold=LjT46G02;name=chr2.LjT46G02.50.nd | + | chr2 | No | |
| LJ2G034080 | lja | partial;prot=eq;transcript=eq;scaffold=LjT46G02;name=chr2.LjT46G02.270.nd | - | chr2 | Yes | |
| LJ6G004260 | lja | partial;prot=eq;transcript=eq;scaffold=LjT30N23;name=chr6.LjT30N23.20.nd | - | chr6 | No | |
| MD00G187470 | mdo | transcript=eq;prot=eq;pid=MDP0000889787;tid=MDP0000889787;contig=MDC008063.227 | + | MDC008063.227 | No | |
| MD14G016950 | mdo | transcript=eq;prot=eq;pid=MDP0000293002;tid=MDP0000293002;contig=MDC012914.254 | - | 14 | No | |
| ME08265G03050 | mes | PACid=17988884;RNAname=cassava4.1_006693m;GeneName=cassava4.1_006693m.g;transcript=eq;prot=eq | - | scaffold08265 | No | |
| ME12439G00060 | mes | PACid=17991611;RNAname=cassava4.1_006703m;GeneName=cassava4.1_006703m.g;transcript=eq;prot=eq | + | scaffold12439 | No |