Gene family  

Sub-families
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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (3 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (3 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM003496 has 38 genes in 25 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 38 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G09640 aly name=fgenesh2_kg.624__1__AT2G39990.1;pid=497488;prot=eq;tid=497488 - scaffold_624 No
AL4G26620 aly name=fgenesh2_kg.4__2098__AT2G39990.1;pid=483038;prot=eq;tid=483038 - scaffold_4 No
AT2G39990 ath translation initiation factor eIF2 p47 subunit homolog;eukaryotic translation initiation factor 2 transcript=eq;prot=eq; - 2 No
BD2G39810 bdi 26S, subfamily 19S pid=Bradi2g39810.1;tid=Bradi2g39810.1;GeneName=Bradi2g39810;Name=BdRPN8a;transcript=eq;prot=eq + Bd2 No
CP00019G01990 cpa name=evm.TU.supercontig_19.200;pid=evm.TU.supercontig_19.200;prot=eq;transcript=eq - supercontig_19 No
CR16G01480 cre name=e_gwW.39.34.1;pid=120842;prot=eq;tid=120842;transcript=eq - chromosome_16 No
FV7G29020 fve Eukaryotic translation initiation factor 3 subunit F (eIF3f) (putative) transcript=eq;prot=eq;pid=gene20926 - LG7 No
GM02G42210 gma 02 pid=16249883;transcript=eq;prot=eq;name=Glyma02g42210.1 - Gm02 No
GM11G35020 gma 11 pid=16285429;transcript=eq;prot=eq;name=Glyma11g35020.1 - Gm11 No
GM14G06690 gma 14 pid=16294610;transcript=eq;prot=eq;name=Glyma14g06690.1 + Gm14 No
GM18G03340 gma 18 pid=16307790;transcript=eq;prot=eq;name=Glyma18g03340.1 + Gm18 No
LJ4G030450 lja partial;prot=eq;transcript=eq;scaffold=LjT06B21;name=chr4.LjT06B21.30.nd - chr4 No
MD14G016860 mdo transcript=eq;prot=eq;pid=MDP0000138792;tid=MDP0000138792;contig=MDC011467.112 - 14 No
MD14G016900 mdo transcript=eq;prot=eq;pid=MDP0000239113;tid=MDP0000239113;contig=MDC008099.122 - 14 No
ME08265G02980 mes PACid=17988931;RNAname=cassava4.1_013128m;GeneName=cassava4.1_013128m.g;transcript=eq;prot=eq - scaffold08265 No
ME08265G03000 mes PACid=17989036;RNAname=cassava4.1_030383m;GeneName=cassava4.1_030383m.g;transcript=eq;prot=eq - scaffold08265 No
ME12439G00100 mes PACid=17991609;RNAname=cassava4.1_033254m;GeneName=cassava4.1_033254m.g;transcript=eq;prot=eq + scaffold12439 No
MRCC299_09G04090 mrcc299 name=EuGene.0900010400;pid=61417;prot=eq;tid=61417;transcript=eq - Chr_09 No
MT3G070190 mtr Eukaryotic translation initiation factor 3 subunit F (AHRD V1 **** O04202); contains Interpro domain(s) IPR000555 Mov34/MPN/PAD-1 transcript=eq;prot=eq;pid=Medtr3g070190.1; - 3 No
MT5G082000 mtr Eukaryotic translation initiation factor 3 subunit F (AHRD V1 **** O04202); contains Interpro domain(s) IPR000555 Mov34/MPN/PAD-1 transcript=eq;prot=eq;pid=Medtr5g082000.1; - 5 No
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