Gene family  

Sub-families
No subfamilies present
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (4 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (3 genes)
gma
Glycine max (2 genes)
lja
Lotus japonicus (4 genes)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (3 genes)



The gene family HOM003435 has 38 genes in 21 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 38 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G09900 aly name=fgenesh2_kg.4__624__AT2G26890.1;pid=481564;prot=eq;tid=481564 - scaffold_4 No
AT2G26890 ath GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation.;DNAJ heat shock N-terminal domain-containing protein transcript=eq;prot=eq; - 2 No
BD3G34450 bdi pid=Bradi3g34450.1;tid=Bradi3g34450.1;GeneName=Bradi3g34450;transcript=eq;prot=eq + Bd3 No
CP00023G01300 cpa name=evm.TU.supercontig_23.130;pid=evm.TU.supercontig_23.130;prot=eq;transcript=eq + supercontig_23 No
CP00023G01340 cpa name=evm.TU.supercontig_23.134;pid=evm.TU.supercontig_23.134;prot=eq;transcript=eq + supercontig_23 No
CP00023G01360 cpa name=evm.TU.supercontig_23.136;pid=evm.TU.supercontig_23.136;prot=eq;transcript=eq + supercontig_23 No
CP00023G01370 cpa name=evm.TU.supercontig_23.137;pid=evm.TU.supercontig_23.137;prot=eq;transcript=eq + supercontig_23 No
CR12G00610 cre name=au.g2803_t3;pid=284374;prot=eq;tid=284381;transcript=eq + chromosome_12 No
FV1G00980 fve DnaJ homolog subfamily C member 13 (RME-8) (probable) transcript=eq;prot=eq;pid=gene02107 + LG1 No
FV1G06650 fve DnaJ homolog subfamily C member 13 (RME-8) (probable) transcript=eq;prot=eq;pid=gene30932 - LG1 No
FV5G41120 fve Uroporphyrinogen decarboxylase (URO-D) (probable) transcript=eq;prot=eq;pid=gene10939 + LG5 No
GM05G08040 gma 05 pid=16258624;transcript=eq;prot=eq;name=Glyma05g08040.1 + Gm05 No
GM17G12950 gma 17 pid=16305393;transcript=eq;prot=eq;name=Glyma17g12950.1 - Gm17 No
LJ0G007650 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_006852;name=LjSGA_006852.1 - LjSGA_006852 No
LJ0G014330 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_009597;name=LjSGA_009597.2 + LjSGA_009597 No
LJ0G220290 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_071490;name=LjSGA_071490.1 + LjSGA_071490 No
LJ0G220780 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_071700;name=LjSGA_071700.1 + LjSGA_071700 No
MD01G002680 mdo transcript=eq;prot=eq;pid=MDP0000187867;tid=MDP0000187867;contig=MDC008735.149 + 1 No
MD02G004180 mdo transcript=eq;prot=eq;pid=MDP0000283610;tid=MDP0000283610;contig=MDC006694.360 - 2 No
MD15G011840 mdo transcript=eq;prot=eq;pid=MDP0000047001;tid=MDP0000047001;contig=MDC008735.178 - 15 No
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