Gene family  

Sub-families
ORTHO002466 (32 genes in 24 species)
ORTHO060506 (2 genes in 2 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (2 genes)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (2 genes)



The gene family HOM003327 has 39 genes in 24 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 39 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G03060 aly name=fgenesh2_kg.4__267__AT2G23370.1;pid=481207;prot=eq;tid=481207 - scaffold_4 No
AL7G06990 aly name=scaffold_700737.1;pid=912995;prot=eq;tid=944508 + scaffold_7 No
AT2G23370 ath unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34090.1); Has 73 Blast hits to 73 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). transcript=eq;prot=eq; - 2 No
AT4G34090 ath unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23370.1). transcript=eq;prot=eq; - 4 No
BD1G77950 bdi pid=Bradi1g77950.1;tid=Bradi1g77950.1;GeneName=Bradi1g77950;transcript=eq;prot=eq + Bd1 No
CP00055G01170 cpa name=evm.TU.supercontig_55.117;pid=evm.TU.supercontig_55.117;prot=eq;transcript=eq - supercontig_55 No
CP00200G00260 cpa name=evm.TU.supercontig_200.26;pid=evm.TU.supercontig_200.26;prot=eq;transcript=eq - supercontig_200 No
CR13G00260 cre name=Chlre2_kg.scaffold_2000022;pid=143294;prot=eq;tid=143294;transcript=eq - chromosome_13 No
FV1G17950 fve hypothetical protein transcript=eq;prot=eq;pid=gene23878 - LG1 No
GM01G39500 gma 01 pid=16245721;transcript=eq;prot=eq;name=Glyma01g39500.1 + Gm01 No
GM11G05750 gma 11 pid=16282819;transcript=eq;prot=eq;name=Glyma11g05750.1 - Gm11 No
MD10G007410 mdo transcript=eq;prot=eq;pid=MDP0000166029;tid=MDP0000166029;contig=MDC004969.328 + 10 No
ME06145G00050 mes PACid=17980055;RNAname=cassava4.1_027094m;GeneName=cassava4.1_027094m.g;transcript=eq;prot=eq + scaffold06145 No
ME06484G00130 mes PACid=17985382;RNAname=cassava4.1_010986m;GeneName=cassava4.1_010986m.g;transcript=eq;prot=eq - scaffold06484 No
MRCC299_03G00700 mrcc299 name=EuGene.0300010070;pid=56642;prot=eq;tid=56642;transcript=eq - Chr_03 No
MRCC299_07G06430 mrcc299 name=EuGene.0700010650;pid=60365;prot=eq;tid=60365;transcript=eq - Chr_07 No
MT7G104350 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr7g104350.1; - 7 No
OL04G03710 olu NULL name=eugene.0400010385,pid=31309,prot=eq,tid=31309 + Chr_4 No
OL06G00360 olu NULL name=eugene.0600010035,pid=31976,prot=eq,tid=31976 + Chr_6 No
OS03G01920 osa expressed protein transcript=eq;prot=eq; - 3 No
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