Gene family  

Sub-families
ORTHO003602 (29 genes in 16 species)
ORTHO051890 (2 genes in 1 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
fve
Fragaria vesca (9 genes)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (10 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (2 genes)
zma
Zea mays (2 genes)



The gene family HOM003276 has 40 genes in 17 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 40 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL7G16800 aly name=fgenesh2_kg.7__1731__AT4G25330.1;pid=492298;prot=eq;tid=492298 - scaffold_7 No
AT4G25330 ath unknown protein; Has 21 Blast hits to 21 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). transcript=eq;prot=eq; + 4 No
BD2G26830 bdi pid=Bradi2g26830.1;tid=Bradi2g26830.1;GeneName=Bradi2g26830;transcript=eq;prot=eq + Bd2 No
FV0G28840 fve Phosphoribosylaminoimidazole-succinocarboxamide synthase (probable) transcript=eq;prot=eq;pid=gene13539 + scf0513178 No
FV2G20880 fve Prolyl-tRNA synthetase (ProRS) (probable) transcript=eq;prot=eq;pid=gene27569 - LG2 Yes
FV2G20890 fve hypothetical protein transcript=eq;prot=eq;pid=gene27570 - LG2 No
FV2G45570 fve Aspartyl-tRNA synthetase (AspRS) (probable) transcript=eq;prot=eq;pid=gene31249 - LG2 No
FV2G45640 fve Proteasome subunit beta type-5, Precursor (probable) transcript=eq;prot=eq;pid=gene31256 + LG2 No
FV3G19510 fve Isoflavone 2'-hydroxylase (probable) transcript=eq;prot=eq;pid=gene27342 - LG3 No
FV6G32850 fve Transmembrane protein 108, Precursor (probable) transcript=eq;prot=eq;pid=gene15538 - LG6 No
FV6G32860 fve hypothetical protein transcript=eq;prot=eq;pid=gene15539 - LG6 No
FV6G32870 fve IMP cyclohydrolase (probable) transcript=eq;prot=eq;pid=gene15540 - LG6 No
GM13G11290 gma 13 pid=16290284;transcript=eq;prot=eq;name=Glyma13g11290.1 - Gm13 No
GM13G25580 gma 13 pid=16291541;transcript=eq;prot=eq;name=Glyma13g25580.1 - Gm13 No
LJ6G001360 lja prot=eq;transcript=eq;scaffold=LjT17I05;name=chr6.LjT17I05.170.nd - chr6 No
MD05G007530 mdo transcript=eq;prot=eq;pid=MDP0000241942;tid=MDP0000241942;contig=MDC013217.293 - 5 No
ME05214G00700 mes PACid=17993816;RNAname=cassava4.1_029284m;GeneName=cassava4.1_029284m.g;transcript=eq;prot=eq + scaffold05214 No
ME07427G00010 mes PACid=17968553;RNAname=cassava4.1_026624m;GeneName=cassava4.1_026624m.g;transcript=eq;prot=eq + scaffold07427 No
ME09298G00010 mes PACid=17977383;RNAname=cassava4.1_031503m;GeneName=cassava4.1_031503m.g;transcript=eq;prot=eq + scaffold09298 No
MT3G082720 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr3g082720.1; + 3 No
<< previous
1 | 2 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier