Gene family  

Sub-families
ORTHO002569 (32 genes in 24 species)
ORTHO028525 (4 genes in 1 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (9 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (3 genes)
olu
Ostreococcus lucimarinus (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM003274 has 40 genes in 24 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 40 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL8G15640 aly name=fgenesh2_kg.8__1028__AT5G51410.2;pid=495212;prot=eq;tid=495212 - scaffold_8 No
AT5G51410 ath LUC7 N_terminus domain-containing protein; CONTAINS InterPro DOMAIN/s: LUC7 related (InterPro:IPR004882); BEST Arabidopsis thaliana protein match is: LUC7 related protein (TAIR:AT3G03340.1); Has 11347 Blast hits to 6019 proteins in 331 species: Archae - 9; Bacteria - 137; Metazoa - 6515; Fungi - 1614; Plants - 1008; Viruses - 20; Other Eukaryotes - 2044 (source: NCBI BLink).;LUC7 N_terminus domain-containing protein transcript=eq;prot=eq; - 5 No
BD1G00510 bdi pid=Bradi1g00510.1;tid=Bradi1g00510.1;GeneName=Bradi1g00510;transcript=eq;prot=eq + Bd1 No
BD1G28650 bdi pid=Bradi1g28650.2;tid=Bradi1g28650.2;GeneName=Bradi1g28650;transcript=eq;prot=eq + Bd1 No
CP00003G03260 cpa name=evm.TU.supercontig_3.326;pid=evm.TU.supercontig_3.326;prot=eq;transcript=eq - supercontig_3 No
CR14G02730 cre name=pasa_Sanger_mRNA12269;pid=395025;prot=eq;tid=402570;transcript=eq + chromosome_14 No
FV7G32740 fve Luc7-like protein 3 (CRE-associated protein 1) (probable) transcript=eq;prot=eq;pid=gene21211 - LG7 No
GM09G35800 gma 09 pid=16277325;transcript=eq;prot=eq;name=Glyma09g35800.1 - Gm09 No
GM12G01550 gma 12 pid=16285984;transcript=eq;prot=eq;name=Glyma12g01550.1 + Gm12 No
LJ3G036450 lja prot=eq;transcript=eq;scaffold=CM0127;name=chr3.CM0127.780.nd - chr3 No
MD00G050240 mdo transcript=eq;prot=eq;pid=MDP0000691623;tid=MDP0000691623;contig=MDC002095.480 - MDC002095.480 No
MD00G093670 mdo transcript=eq;prot=eq;pid=MDP0000277221;tid=MDP0000277221;contig=MDC004004.237 + MDC004004.237 No
MD00G334210 mdo transcript=eq;prot=eq;pid=MDP0000292734;tid=MDP0000292734;contig=MDC014148.100 - MDC014148.100 No
MD00G366030 mdo transcript=eq;prot=eq;pid=MDP0000599367;tid=MDP0000599367;contig=MDC016501.434 - MDC016501.434 No
MD00G407170 mdo transcript=eq;prot=eq;pid=MDP0000252268;tid=MDP0000252268;contig=MDC018531.168 + MDC018531.168 No
MD00G461230 mdo transcript=eq;prot=eq;pid=MDP0000218041;tid=MDP0000218041;contig=MDC021321.379 - MDC021321.379 No
MD01G017100 mdo transcript=eq;prot=eq;pid=MDP0000281096;tid=MDP0000281096;contig=MDC006273.129 + 1 No
MD07G016690 mdo transcript=eq;prot=eq;pid=MDP0000150262;tid=MDP0000150262;contig=MDC009631.580 + 7 No
MD16G016810 mdo transcript=eq;prot=eq;pid=MDP0000321714;tid=MDP0000321714;contig=MDC020315.266 + 16 No
ME06701G00480 mes PACid=17985348;RNAname=cassava4.1_014477m;GeneName=cassava4.1_014477m.g;transcript=ne;prot=eq + scaffold06701 No
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