Gene family  

Sub-families
ORTHO001945 (34 genes in 25 species)
ORTHO066723 (2 genes in 2 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (5 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (3 genes)
olu
Ostreococcus lucimarinus (2 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family HOM003193 has 41 genes in 25 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 41 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G20240 aly name=fgenesh2_kg.1__2104__AT1G23280.1;pid=472150;prot=eq;tid=472150 - scaffold_1 No
AL1G25110 aly name=scaffold_102662.1;pid=889868;prot=eq;tid=921381 - scaffold_1 No
AT1G23280 ath MAK16 protein-related; CONTAINS InterPro DOMAIN/s: Mak16 protein (InterPro:IPR006958); Has 4868 Blast hits to 3538 proteins in 334 species: Archae - 9; Bacteria - 248; Metazoa - 1831; Fungi - 653; Plants - 272; Viruses - 128; Other Eukaryotes - 1727 (source: NCBI BLink).;MAK16 protein-related transcript=eq;prot=eq; - 1 No
BD2G14350 bdi pid=Bradi2g14350.1;tid=Bradi2g14350.1;GeneName=Bradi2g14350;transcript=eq;prot=eq + Bd2 No
CP00033G00220 cpa name=evm.TU.supercontig_33.22;pid=evm.TU.supercontig_33.22;prot=eq;transcript=eq + supercontig_33 No
CR02G15490 cre name=OVA_estExt_gwp_1H.C_240087;pid=206198;prot=eq;tid=206203;transcript=eq - chromosome_2 No
FV0G10790 fve Protein MAK16 homolog B (probable) transcript=eq;prot=eq;pid=gene06993 - scf0513160 No
FV7G36860 fve Protein MAK16 homolog (similar to) transcript=eq;prot=eq;pid=gene13104 + LG7 No
GM06G43930 gma 06 pid=16265101;transcript=eq;prot=eq;name=Glyma06g43930.1 + Gm06 No
GM12G14000 gma 12 pid=16287421;transcript=eq;prot=eq;name=Glyma12g14000.1 - Gm12 No
LJ1G026910 lja prot=eq;transcript=eq;scaffold=CM0284;name=chr1.CM0284.260.nc - chr1 No
MD00G207720 mdo transcript=eq;prot=eq;pid=MDP0000947449;tid=MDP0000947449;contig=MDC008968.449 - MDC008968.449 No
MD00G237000 mdo transcript=eq;prot=eq;pid=MDP0000702352;tid=MDP0000702352;contig=MDC010289.153 - MDC010289.153 No
MD00G237010 mdo transcript=eq;prot=eq;pid=MDP0000187617;tid=MDP0000187617;contig=MDC010289.161 + MDC010289.161 No
MD03G017230 mdo transcript=eq;prot=eq;pid=MDP0000330332;tid=MDP0000330332;contig=MDC010289.159 - 3 No
MD11G017940 mdo transcript=eq;prot=eq;pid=MDP0000153127;tid=MDP0000153127;contig=MDC017509.167 + 11 No
ME12211G00270 mes PACid=17986466;RNAname=cassava4.1_012759m;GeneName=cassava4.1_012759m.g;transcript=eq;prot=eq + scaffold12211 No
MRCC299_01G03760 mrcc299 name=PierreAnnot_Mak16;pid=107324;prot=eq;tid=107324;transcript=eq - Chr_01 No
MT2G103560 mtr Protein MAK16 homolog A (AHRD V1 *-*- Q66L33); contains Interpro domain(s) IPR006958 Mak16 protein transcript=eq;prot=eq;pid=Medtr2g103560.1; + 2 No
MT4G079000 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR006958 Mak16 protein transcript=eq;prot=eq;pid=Medtr4g079000.1; - 4 No
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