Gene family  

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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (4 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (7 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM003191 has 41 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 41 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G10280 aly name=fgenesh2_kg.4__639__AT2G26990.1;pid=481579;prot=eq;tid=481579 - scaffold_4 No
AL8G29320 aly name=Al_scaffold_0008_2806;pid=886542;prot=eq;tid=918055 - scaffold_8 No
AT2G26990 ath Represses photomorphogenesis and induces skotomorphogenesis in the dark.;proteasome family protein transcript=eq;prot=eq; - 2 No
BD2G10780 bdi transcription corepressor activity (Blast2GO) pid=Bradi2g10780.1;tid=Bradi2g10780.1;GeneName=Bradi2g10780;transcript=eq;prot=eq + Bd2 No
CP00084G00800 cpa name=evm.TU.supercontig_84.80;pid=evm.TU.supercontig_84.80;prot=eq;transcript=eq - supercontig_84 No
CR01G06380 cre name=estExt_fgenesh2_pg.C_10386;pid=189898;prot=eq;tid=189898;transcript=eq - chromosome_1 No
FV0G01830 fve COP9 signalosome complex subunit 2 (Signalosome subunit 2) (similar to) transcript=eq;prot=eq;pid=gene03759 - scf0513158 No
FV2G47660 fve COP9 signalosome complex subunit 2 (Signalosome subunit 2) (similar to) transcript=eq;prot=eq;pid=gene15370 - LG2 No
GM03G00670 gma 03 pid=16250682;transcript=eq;prot=eq;name=Glyma03g00670.1 - Gm03 No
GM05G14170 gma 05 pid=16258918;transcript=eq;prot=eq;name=Glyma05g14170.1 - Gm05 No
GM19G17660 gma 19 pid=16312459;transcript=eq;prot=eq;name=Glyma19g17660.1 - Gm19 No
GM19G30100 gma 19 pid=16313251;transcript=eq;prot=eq;name=Glyma19g30100.1 + Gm19 No
LJ1G042530 lja partial;prot=eq;transcript=eq;scaffold=CM1409;name=chr1.CM1409.130.nd - chr1 No
LJ1G042560 lja partial;prot=eq;transcript=eq;scaffold=CM1409;name=chr1.CM1409.160.nd - chr1 No
MD00G175160 mdo transcript=eq;prot=eq;pid=MDP0000179694;tid=MDP0000179694;contig=MDC007496.127 + MDC007496.127 No
MD00G175170 mdo transcript=eq;prot=eq;pid=MDP0000182626;tid=MDP0000182626;contig=MDC007496.70 + MDC007496.70 No
MD00G312120 mdo transcript=eq;prot=eq;pid=MDP0000292529;tid=MDP0000292529;contig=MDC013244.156 + MDC013244.156 No
MD00G411550 mdo transcript=eq;prot=eq;pid=MDP0000153421;tid=MDP0000153421;contig=MDC018721.34 + MDC018721.34 No
MD00G411560 mdo transcript=eq;prot=eq;pid=MDP0000307117;tid=MDP0000307117;contig=MDC018721.40 - MDC018721.40 No
MD03G014000 mdo transcript=eq;prot=eq;pid=MDP0000201215;tid=MDP0000201215;contig=MDC012472.144 - 3 No
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