Gene family  

Sub-families
ORTHO004027 (28 genes in 22 species)
ORTHO015442 (10 genes in 9 species)
ORTHO055366 (2 genes in 1 species)
View all sub-families (3)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (3 genes)
mdo
Malus domestica (9 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (2 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM003104 has 42 genes in 23 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 42 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G31780 aly name=fgenesh2_kg.6__2951__AT4G09650.1;pid=489817;prot=eq;tid=489817 + scaffold_6 No
AT4G09650 ath Encodes the chloroplast ATPase delta-subunit.;ATP synthase delta-subunit gene transcript=eq;prot=eq; + 4 No
BD3G59130 bdi hydrogen ion transporting ATPase activity, rotational mechanism (Blast2GO) pid=Bradi3g59130.1;tid=Bradi3g59130.1;GeneName=Bradi3g59130;transcript=eq;prot=eq - Bd3 No
CP00066G01090 cpa name=evm.TU.supercontig_66.109;pid=evm.TU.supercontig_66.109;prot=eq;transcript=eq + supercontig_66 No
CP00096G00670 cpa name=evm.TU.supercontig_96.67;pid=evm.TU.supercontig_96.67;prot=eq;transcript=eq - supercontig_96 No
CR18G01430 cre name=estExt_gwp_1H.C_660032;pid=132678;prot=eq;tid=132678;transcript=eq + scaffold_18 No
FV2G20270 fve ATP synthase delta chain, chloroplastic, Precursor (similar to) transcript=eq;prot=eq;pid=gene27510 + LG2 No
FV7G04840 fve ATP synthase delta chain, chloroplastic, Precursor (probable) transcript=eq;prot=eq;pid=gene18668 + LG7 No
GM05G03340 gma 05 pid=16258167;transcript=eq;prot=eq;name=Glyma05g03340.1 - Gm05 No
GM17G13930 gma 17 pid=16305505;transcript=eq;prot=eq;name=Glyma17g13930.1 - Gm17 No
GM19G44720 gma 19 pid=16314952;transcript=eq;prot=eq;name=Glyma19g44720.1 - Gm19 No
MD00G045100 mdo transcript=eq;prot=eq;pid=MDP0000156595;tid=MDP0000156595;contig=MDC001906.217 + MDC001906.217 No
MD00G069430 mdo transcript=eq;prot=eq;pid=MDP0000172579;tid=MDP0000172579;contig=MDC002891.582 + MDC002891.582 Yes
MD00G083940 mdo transcript=eq;prot=eq;pid=MDP0000563591;tid=MDP0000563591;contig=MDC003558.319 + MDC003558.319 No
MD00G140560 mdo transcript=eq;prot=eq;pid=MDP0000180266;tid=MDP0000180266;contig=MDC006008.439 + MDC006008.439 No
MD00G140570 mdo transcript=eq;prot=eq;pid=MDP0000729750;tid=MDP0000729750;contig=MDC006008.441 - MDC006008.441 No
MD00G140580 mdo transcript=eq;prot=eq;pid=MDP0000729751;tid=MDP0000729751;contig=MDC006008.441 - MDC006008.441 No
MD00G340150 mdo transcript=eq;prot=eq;pid=MDP0000196555;tid=MDP0000196555;contig=MDC015170.114 + MDC015170.114 No
MD00G388510 mdo transcript=eq;prot=eq;pid=MDP0000243728;tid=MDP0000243728;contig=MDC017594.128 - MDC017594.128 No
MD09G020320 mdo transcript=eq;prot=eq;pid=MDP0000750535;tid=MDP0000750535;contig=MDC003558.335 + 9 No
<< previous
1 | 2 | 3 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier