Gene family  

Sub-families
ORTHO009691 (20 genes in 16 species)
ORTHO020245 (6 genes in 5 species)
ORTHO028050 (4 genes in 3 species)
View all sub-families (5)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (8 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (6 genes)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (6 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family HOM003096 has 42 genes in 17 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 42 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL8G32500 aly name=scaffold_803302.1;pid=919902;prot=eq;tid=951415 - scaffold_8 No
AT5G65660 ath hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;hydroxyproline-rich glycoprotein family protein transcript=eq;prot=eq; - 5 No
BD1G01270 bdi pid=Bradi1g01270.1;tid=Bradi1g01270.1;GeneName=Bradi1g01270;transcript=eq;prot=eq - Bd1 No
CP00129G00220 cpa name=evm.TU.supercontig_129.22;pid=evm.TU.supercontig_129.22;prot=eq;transcript=eq - supercontig_129 No
FV0G20800 fve Uncharacterized protein At5g65660 (similar to) transcript=eq;prot=eq;pid=gene05557 + scf0513160 No
FV5G23890 fve hypothetical protein transcript=eq;prot=eq;pid=gene26804 + LG5 No
GM01G02360 gma 01 pid=16243147;transcript=eq;prot=eq;name=Glyma01g02360.1 + Gm01 No
GM02G38250 gma 02 pid=16249441;transcript=eq;prot=eq;name=Glyma02g38250.1 + Gm02 No
GM04G09570 gma 04 pid=16255431;transcript=eq;prot=eq;name=Glyma04g09570.1 - Gm04 No
GM06G09660 gma 06 pid=16262336;transcript=eq;prot=eq;name=Glyma06g09660.1 - Gm06 No
GM08G37180 gma 08 pid=16273041;transcript=eq;prot=eq;name=Glyma08g37180.1 - Gm08 No
GM09G33610 gma 09 pid=16277068;transcript=eq;prot=eq;name=Glyma09g33610.1 - Gm09 No
GM14G36380 gma 14 pid=16296599;transcript=eq;prot=eq;name=Glyma14g36380.1 + Gm14 No
GM18G24740 gma 18 pid=16309322;transcript=eq;prot=eq;name=Glyma18g24740.1 - Gm18 No
LJ0G021000 lja prot=eq;transcript=eq;scaffold=LjSGA_011803;name=LjSGA_011803.1 - LjSGA_011803 No
LJ2G019730 lja prot=eq;transcript=eq;scaffold=CM0177;name=chr2.CM0177.530.nc - chr2 No
MD01G003840 mdo transcript=eq;prot=eq;pid=MDP0000320707;tid=MDP0000320707;contig=MDC023054.83 - 1 No
MD08G019610 mdo transcript=eq;prot=eq;pid=MDP0000834410;tid=MDP0000834410;contig=MDC020873.437 - 8 No
MD12G004660 mdo transcript=eq;prot=eq;pid=MDP0000303395;tid=MDP0000303395;contig=MDC017910.349 - 12 No
MD12G004670 mdo transcript=eq;prot=eq;pid=MDP0000697140;tid=MDP0000697140;contig=MDC021864.238 - 12 No
<< previous
1 | 2 | 3 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier