Gene family  

Sub-families
ORTHO010928 (18 genes in 13 species)
ORTHO013197 (14 genes in 11 species)
ORTHO015999 (9 genes in 8 species)
View all sub-families (3)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (3 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (3 genes)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (5 genes)
mtr
Medicago truncatula (3 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (4 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (2 genes)



The gene family HOM003081 has 42 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 42 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL7G17460 aly name=fgenesh1_pm.C_scaffold_7001422;pid=329195;prot=eq;tid=329195 - scaffold_7 No
AL8G29580 aly name=fgenesh2_kg.8__2301__AT5G63050.1;pid=496485;prot=eq;tid=496485 + scaffold_8 No
AT4G24680 ath Encodes MOS1 (MODIFIER OF snc1). MOS1 contains a BAT2 domain that is conserved in plants and animals. MOS1 regulates the expression of SNC1, a TIR-NB-LRR-type of R protein.;modifier of snc1 transcript=eq;prot=eq; + 4 No
AT5G63050 ath embryo defective 2759 (EMB2759); Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;embryo defective 2759 transcript=eq;prot=eq; + 5 No
BD4G04400 bdi nuclear hormone receptor binding (Blast2GO) pid=Bradi4g04400.1;tid=Bradi4g04400.1;GeneName=Bradi4g04400;transcript=eq;prot=eq - Bd4 No
CP00153G00060 cpa name=evm.TU.supercontig_153.6;pid=evm.TU.supercontig_153.6;prot=eq;transcript=eq - supercontig_153 No
CP00153G00070 cpa name=evm.TU.supercontig_153.7;pid=evm.TU.supercontig_153.7;prot=eq;transcript=eq - supercontig_153 No
CP00153G00080 cpa name=evm.TU.supercontig_153.8;pid=evm.TU.supercontig_153.8;prot=eq;transcript=eq - supercontig_153 No
FV5G06530 fve Filaggrin (probable) transcript=eq;prot=eq;pid=gene32219 - LG5 No
GM04G35910 gma 04 pid=16256886;transcript=eq;prot=eq;name=Glyma04g35910.1 - Gm04 No
GM05G02400 gma 05 pid=16258059;transcript=eq;prot=eq;name=Glyma05g02400.1 - Gm05 No
GM06G19030 gma 06 pid=16263470;transcript=eq;prot=eq;name=Glyma06g19030.1 + Gm06 No
GM17G09510 gma 17 pid=16304985;transcript=eq;prot=eq;name=Glyma17g09510.1 + Gm17 No
LJ0G036200 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_015624;name=LjSGA_015624.1 + LjSGA_015624 No
LJ0G080100 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_026717;name=LjSGA_026717.1 + LjSGA_026717 No
LJ0G256840 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_085599;name=LjSGA_085599.1 - LjSGA_085599 No
MD00G234700 mdo transcript=eq;prot=eq;pid=MDP0000263251;tid=MDP0000263251;contig=MDC010187.451 - MDC010187.451 No
MD00G234710 mdo transcript=eq;prot=eq;pid=MDP0000661983;tid=MDP0000661983;contig=MDC010187.451 - MDC010187.451 No
MD06G013970 mdo transcript=eq;prot=eq;pid=MDP0000307988;tid=MDP0000307988;contig=MDC017325.138 + 6 No
ME03410G00150 mes PACid=17972931;RNAname=cassava4.1_011099m;GeneName=cassava4.1_011099m.g;transcript=eq;prot=eq - scaffold03410 No
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