Gene family  

Sub-families
ORTHO002354 (32 genes in 25 species)
ORTHO047932 (2 genes in 2 species)
ORTHO075589 (2 genes in 1 species)
View all sub-families (3)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (5 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (5 genes)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family HOM002996 has 43 genes in 25 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 43 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G09480 aly name=fgenesh2_kg.1__1032__AT1G09770.1;pid=471078;prot=eq;tid=471078 + scaffold_1 No
AL5G01170 aly name=scaffold_500129.1;pid=904425;prot=eq;tid=935938 + scaffold_5 No
AT1G09770 ath Member of MYB3R- and R2R3- type MYB- encoding genes. Essential for plant innate immunity. Interacts with MOS4 and PRL1.;cell division cycle 5 transcript=eq;prot=eq; + 1 No
BD4G07110 bdi MYB transcrition factor pid=Bradi4g07110.1;tid=Bradi4g07110.1;GeneName=Bradi4g07110;Name=BdMYB82;transcript=eq;prot=eq - Bd4 No
CP00306G00010 cpa name=evm.TU.supercontig_306.1;pid=evm.TU.supercontig_306.1;prot=eq;transcript=eq + supercontig_306 No
CP00306G00020 cpa name=evm.TU.supercontig_306.2;pid=evm.TU.supercontig_306.2;prot=eq;transcript=eq + supercontig_306 No
CR03G10120 cre name=estExt_fgenesh1_pm.C_chromosome_30518;pid=377858;prot=eq;tid=377865;transcript=eq - chromosome_3 No
FV0G26470 fve Cell division cycle 5-related protein (probable) transcript=eq;prot=eq;pid=gene16655 + scf0513168 No
FV3G17950 fve Cell division cycle 5-related protein (probable) transcript=eq;prot=eq;pid=gene27215 - LG3 No
GM10G30870 gma 10 pid=16280507;transcript=eq;prot=eq;name=Glyma10g30870.1 + Gm10 No
GM20G36600 gma 20 pid=16318083;transcript=eq;prot=eq;name=Glyma20g36600.1 - Gm20 No
LJ1G055780 lja partial;prot=eq;transcript=eq;scaffold=CM0600;name=chr1.CM0600.100.nd - chr1 No
MD00G256470 mdo transcript=eq;prot=eq;pid=MDP0000191083;tid=MDP0000191083;contig=MDC011000.158 - MDC011000.158 No
MD00G351330 mdo transcript=eq;prot=eq;pid=MDP0000213015;tid=MDP0000213015;contig=MDC015744.226 - MDC015744.226 No
MD04G018230 mdo transcript=eq;prot=eq;pid=MDP0000295590;tid=MDP0000295590;contig=MDC011727.163 + 4 No
MD04G018760 mdo transcript=eq;prot=eq;pid=MDP0000151195;tid=MDP0000151195;contig=MDC015744.159 + 4 No
MD12G024240 mdo transcript=eq;prot=eq;pid=MDP0000878701;tid=MDP0000878701;contig=MDC021005.215 + 12 No
ME03614G02980 mes PACid=17966120;RNAname=cassava4.1_000851m;GeneName=cassava4.1_000851m.g;transcript=eq;prot=eq - scaffold03614 No
ME03802G00280 mes PACid=17989427;RNAname=cassava4.1_000846m;GeneName=cassava4.1_000846m.g;transcript=eq;prot=eq - scaffold03802 No
MRCC299_01G02970 mrcc299 name=e_gw2.01.888.1;pid=77618;prot=eq;tid=77618;transcript=eq + Chr_01 No
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