Gene family  

Sub-families
ORTHO011011 (18 genes in 13 species)
ORTHO015283 (10 genes in 9 species)
ORTHO052685 (2 genes in 1 species)
View all sub-families (4)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (4 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (3 genes)
gma
Glycine max (6 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (7 genes)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (2 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (3 genes)



The gene family HOM002968 has 43 genes in 16 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 43 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G00840 aly name=scaffold_600087.1;pid=908030;prot=eq;tid=939543 + scaffold_6 Yes
AT2G38160 ath unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.2); Has 972 Blast hits to 731 proteins in 211 species: Archae - 0; Bacteria - 236; Metazoa - 194; Fungi - 201; Plants - 218; Viruses - 32; Other Eukaryotes - 91 (source: NCBI BLink). transcript=eq;prot=eq; - 2 No
AT2G40070 ath BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). transcript=eq;prot=eq; - 2 No
AT3G09000 ath proline-rich family protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.1); Has 72642 Blast hits to 41597 proteins in 1862 species: Archae - 219; Bacteria - 10073; Metazoa - 26321; Fungi - 16532; Plants - 3439; Viruses - 1862; Other Eukaryotes - 14196 (source: NCBI BLink).;proline-rich family protein transcript=eq;prot=eq; + 3 No
AT5G01280 ath BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). transcript=eq;prot=eq; - 5 No
BD2G02760 bdi pid=Bradi2g02760.1;tid=Bradi2g02760.1;GeneName=Bradi2g02760;transcript=eq;prot=eq + Bd2 No
CP00019G01870 cpa name=evm.TU.supercontig_19.188;pid=evm.TU.supercontig_19.188;prot=eq;transcript=eq + supercontig_19 No
CP00163G00180 cpa name=evm.TU.supercontig_163.18;pid=evm.TU.supercontig_163.18;prot=eq;transcript=eq - supercontig_163 No
FV6G10620 fve Probable LRR receptor-like serine/threonine-protein kinase At1g56140, Precursor transcript=eq;prot=eq;pid=gene18856 + LG6 No
FV7G29290 fve ATP-dependent DNA helicase SRS2 (probable) transcript=eq;prot=eq;pid=gene20953 - LG7 No
FV7G29320 fve hypothetical protein transcript=eq;prot=eq;pid=gene20956 - LG7 No
GM02G42350 gma 02 pid=16249902;transcript=eq;prot=eq;name=Glyma02g42350.1 - Gm02 No
GM07G18030 gma 07 pid=16267651;transcript=eq;prot=eq;name=Glyma07g18030.1 - Gm07 No
GM11G35090 gma 11 pid=16285437;transcript=eq;prot=eq;name=Glyma11g35090.1 - Gm11 No
GM14G06550 gma 14 pid=16294586;transcript=eq;prot=eq;name=Glyma14g06550.1 + Gm14 No
GM18G03250 gma 18 pid=16307781;transcript=eq;prot=eq;name=Glyma18g03250.1 + Gm18 No
GM18G42850 gma 18 pid=16310273;transcript=eq;prot=eq;name=Glyma18g42850.1 - Gm18 No
LJ0G420530 lja prot=eq;transcript=eq;scaffold=LjT35D08;name=LjT35D08.10.nd - chr0 No
LJ0G432220 lja partial;prot=eq;transcript=eq;scaffold=LjT36B17;name=LjT36B17.170.nd - chr0 No
MD00G108680 mdo transcript=eq;prot=eq;pid=MDP0000428028;tid=MDP0000428028;contig=MDC004634.209 + MDC004634.209 No
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