Gene family 
- Id
- HOM002955
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO006548 (24 genes in 19 species)
ORTHO012147 (16 genes in 12 species)
View all sub-families (2)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (1 gene)
- ath
- Arabidopsis thaliana (4 genes)
- cpa
- Carica papaya (1 gene)
- cre
- Chlamydomonas reinhardtii (1 gene)
- gma
- Glycine max (3 genes)
- lja
- Lotus japonicus (3 genes)
- mdo
- Malus domestica (1 gene)
- mrcc299
- Micromonas sp. RCC299 (1 gene)
- mtr
- Medicago truncatula (3 genes)
- osa
- Oryza sativa ssp. japonica (3 genes)
- osaindica
- Oryza sativa ssp. indica (2 genes)
- ota
- Ostreococcus tauri (1 gene)
- ppa
- Physcomitrella patens (2 genes)
- ptr
- Populus trichocarpa (1 gene)
- rco
- Ricinus communis (1 gene)
- sbi
- Sorghum bicolor (2 genes)
- smo
- Selaginella moellendorffii (1 gene)
- tca
- Theobroma cacao (2 genes)
- vca
- Volvox carteri (1 gene)
- vvi
- Vitis vinifera (3 genes)
- zma
- Zea mays (7 genes)
The gene family HOM002955 has 44 genes in 21 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM002955
Page 1 of 3, showing 20 records out of 44 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL5G09840 | aly | name=fgenesh2_kg.5__730__AT2G07687.1;pid=484738;prot=eq;tid=484738 | - | scaffold_5 | No | |
| AT2G07687 | ath | Cytochrome c oxidase, subunit III; FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: mitochondrial electron transport, cytochrome c to oxygen; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit III (InterPro:IPR000298); BEST Arabidopsis thaliana protein match is: cytochrome c oxidase subunit 3 (TAIR:ATMG00730.1); Has 29038 Blast hits to 29025 proteins in 5946 species: Archae - 74; Bacteria - 4466; Metazoa - 19232; Fungi - 401; Plants - 673; Viruses - 0; Other Eukaryotes - 4192 (source: NCBI BLink).;Cytochrome c oxidase, subunit III | transcript=eq;prot=eq; | - | 2 | No |
| AT2G07707 | ath | Plant mitochondrial ATPase, F0 complex, subunit 8 protein; FUNCTIONS IN: cobalt ion binding; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: mitochondrion, vacuole, membrane; EXPRESSED IN: cultured cell, leaf; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit 8, mitochondrial, plant (InterPro:IPR003319), Protein of unknown function DUF1082, plant mitochondria (InterPro:IPR009455); BEST Arabidopsis thaliana protein match is: Plant mitochondrial ATPase, F0 complex, subunit 8 protein (TAIR:ATMG00480.1); Has 226 Blast hits to 226 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 218; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).;Plant mitochondrial ATPase, F0 complex, subunit 8 protein | transcript=eq;prot=eq; | + | 2 | No |
| ATMG00480 | ath | Encodes subunit 8 of the mitochondrial F(O) ATP synthase complex.;Plant mitochondrial ATPase, F0 complex, subunit 8 protein | transcript=eq;prot=eq; | + | mitochondrial | No |
| ATMG00730 | ath | Encodes cytochrome c oxidase subunit 3.;cytochrome c oxidase subunit 3 | transcript=eq;prot=eq; | + | mitochondrial | No |
| CP32646G00010 | cpa | name=evm.TU.contig_32646.1;pid=evm.TU.contig_32646.1;prot=eq;transcript=eq | - | contig_32646 | No | |
| CR04G02000 | cre | name=estExt_GenewiseH_1.C_150140;pid=56014;prot=eq;tid=56014;transcript=eq | + | chromosome_4 | No | |
| GM00G00745 | gma | 405 | pid=16254290;transcript=eq;prot=eq;name=Glyma0405s00220.2 | - | scaffold_405 | No |
| GM00G01025 | gma | 2269 | pid=16318415;transcript=eq;prot=eq;name=Glyma2269s00200.1 | + | scaffold_2269 | No |
| GM12G24990 | gma | 12 | pid=16288090;transcript=eq;prot=eq;name=Glyma12g24990.1 | - | Gm12 | No |
| LJ0G000620 | lja | prot=eq;transcript=eq;scaffold=LjSGA_000271;name=LjSGA_000271.2 | + | LjSGA_000271 | No | |
| LJ0G002340 | lja | prot=eq;transcript=eq;scaffold=LjSGA_003279;name=LjSGA_003279.1 | + | LjSGA_003279 | No | |
| LJ0G002350 | lja | partial;prot=eq;transcript=eq;scaffold=LjSGA_003280;name=LjSGA_003280.1 | + | LjSGA_003280 | No | |
| MD09G011280 | mdo | transcript=eq;prot=eq;pid=MDP0000809400;tid=MDP0000809400;contig=MDC015172.255 | + | 9 | No | |
| MRCC299_MG00210 | mrcc299 | cox3;cytochrome oxidase subunit 3;protein_id=ACO55590.1; | + | mitochondrial | No | |
| MT1G005150 | mtr | Cytochrome c oxidase subunit 3 (AHRD V1 **** Q8M617_SOLTU); contains Interpro domain(s) IPR000298 Cytochrome c oxidase, subunit III | transcript=eq;prot=eq;pid=Medtr1g005150.1; | - | 1 | No |
| MT6G032900 | mtr | Cytochrome c oxidase subunit 3 (AHRD V1 ***- Q8M617_SOLTU); contains Interpro domain(s) IPR000298 Cytochrome c oxidase, subunit III | transcript=eq;prot=eq;pid=Medtr6g032900.1; | + | 6 | No |
| MT7G101570 | mtr | ATPase subunit 8 (Fragment) (AHRD V1 ***- Q5MFC9_ESCCA) | transcript=eq;prot=eq;pid=Medtr7g101570.1; | + | 7 | No |
| OS12G34018 | osa | ATP synthase protein YMF19, putative, expressed | transcript=eq;prot=eq; | - | 12 | No |
| OSINDICA_MG00020 | osaindica | cox3;cytochrome c oxidase subunit 3;protein_id=AAZ99284.1; | - | mitochondrial | No |