Gene family  

Sub-families
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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (3 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (2 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (3 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (5 genes)



The gene family HOM002864 has 45 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 45 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G01700 aly name=scaffold_400174.1;pid=900673;prot=eq;tid=932186 - scaffold_4 No
AL6G09870 aly name=fgenesh2_kg.6__978__AT5G10170.1;pid=487844;prot=eq;tid=487844 - scaffold_6 No
AL7G02010 aly name=scaffold_700208.1;pid=912466;prot=eq;tid=943979 - scaffold_7 No
AT2G22240 ath ** Referred to as MIPS1 in Mitsuhashi et al 2008. Myo-inositol-1-phosphate synthase isoform 2. Expressed in leaf, root and silique. Immunolocalization experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.;myo-inositol-1-phosphate synthase 2 transcript=eq;prot=eq; - 2 No
AT4G39800 ath ** Referred to as MIPS2 in Mitsuhashi et al 2008. myo-inositol-1-phosphate synthase isoform 1.Expressed in leaf, root and silique. Immunolocalization experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.;myo-inositol-1-phosphate synthase 1 transcript=eq;prot=eq; - 4 No
AT5G10170 ath myo-inositol-1-phosphate synthase isoform 3.Expressed in leaf, root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.;myo-inositol-1-phosphate synthase 3 transcript=eq;prot=eq; - 5 No
BD1G71667 bdi pid=Bradi1g71667.1;tid=Bradi1g71667.1;GeneName=Bradi1g71667;transcript=eq;prot=eq - Bd1 No
BD3G25600 bdi pid=Bradi3g25600.1;tid=Bradi3g25600.1;GeneName=Bradi3g25600;transcript=eq;prot=eq - Bd3 No
CP00557G00020 cpa name=evm.TU.supercontig_557.2;pid=evm.TU.supercontig_557.2;prot=eq;transcript=eq - supercontig_557 No
CR03G06610 cre name=estExt_fgenesh2_pg.C_90007;pid=188120;prot=eq;tid=188120;transcript=eq - chromosome_3 No
FV0G23570 fve Inositol-3-phosphate synthase (MI-1-P synthase) transcript=eq;prot=eq;pid=gene16378 - scf0513168 No
GM05G31450 gma 05 pid=16260290;transcript=eq;prot=eq;name=Glyma05g31450.1 + Gm05 No
GM08G14670 gma 08 pid=16271157;transcript=eq;prot=eq;name=Glyma08g14670.1 + Gm08 No
GM18G02210 gma 18 pid=16307664;transcript=eq;prot=eq;name=Glyma18g02210.1 + Gm18 No
LJ4G029950 lja prot=eq;transcript=eq;scaffold=CM0307;name=chr4.CM0307.90.nc - chr4 No
LJ6G003690 lja prot=eq;transcript=eq;scaffold=LjT23A02;name=chr6.LjT23A02.60.nc + chr6 No
MD00G064480 mdo transcript=eq;prot=eq;pid=MDP0000459576;tid=MDP0000459576;contig=MDC002689.465 - MDC002689.465 No
MD00G396230 mdo transcript=eq;prot=eq;pid=MDP0000207103;tid=MDP0000207103;contig=MDC017990.277 + MDC017990.277 No
MD06G004990 mdo transcript=eq;prot=eq;pid=MDP0000698835;tid=MDP0000698835;contig=MDC017990.257 + 6 No
ME05587G00010 mes PACid=17960369;RNAname=cassava4.1_005838m;GeneName=cassava4.1_005838m.g;transcript=eq;prot=eq + scaffold05587 No
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