Gene family 
- Id
- HOM002846
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO014265 (12 genes in 11 species)
ORTHO052518 (2 genes in 1 species)
ORTHO055910 (2 genes in 1 species)
View all sub-families (3)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (1 gene)
- ath
- Arabidopsis thaliana (1 gene)
- bdi
- Brachypodium distachyon (2 genes)
- cpa
- Carica papaya (2 genes)
- cre
- Chlamydomonas reinhardtii (1 gene)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (5 genes)
- lja
- Lotus japonicus (2 genes)
- mdo
- Malus domestica (4 genes)
- mes
- Manihot esculenta (2 genes)
- mrcc299
- Micromonas sp. RCC299 (2 genes)
- mtr
- Medicago truncatula (2 genes)
- osa
- Oryza sativa ssp. japonica (2 genes)
- osaindica
- Oryza sativa ssp. indica (3 genes)
- ppa
- Physcomitrella patens (1 gene)
- ptr
- Populus trichocarpa (2 genes)
- rco
- Ricinus communis (2 genes)
- sbi
- Sorghum bicolor (3 genes)
- tca
- Theobroma cacao (2 genes)
- vca
- Volvox carteri (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (3 genes)
The gene family HOM002846 has 45 genes in 22 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM002846
Page 1 of 3, showing 20 records out of 45 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL6G32430 | aly | name=fgenesh1_pm.C_scaffold_6002408;pid=327188;prot=eq;tid=327188 | - | scaffold_6 | No | |
| AT4G10130 | ath | DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Zinc finger, DPH-type (InterPro:IPR007872); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G13310.1); Has 18672 Blast hits to 18671 proteins in 2948 species: Archae - 158; Bacteria - 7534; Metazoa - 3304; Fungi - 1856; Plants - 1763; Viruses - 10; Other Eukaryotes - 4047 (source: NCBI BLink).;DNAJ heat shock N-terminal domain-containing protein | transcript=eq;prot=eq; | - | 4 | No |
| BD3G38110 | bdi | pid=Bradi3g38110.1;tid=Bradi3g38110.1;GeneName=Bradi3g38110;transcript=eq;prot=eq | - | Bd3 | No | |
| BD3G58160 | bdi | pid=Bradi3g58160.1;tid=Bradi3g58160.1;GeneName=Bradi3g58160;transcript=eq;prot=eq | + | Bd3 | No | |
| CP24415G00020 | cpa | name=evm.TU.contig_24415.2;pid=evm.TU.contig_24415.2;prot=eq;transcript=eq | - | contig_24415 | No | |
| CP24415G00030 | cpa | name=evm.TU.contig_24415.3;pid=evm.TU.contig_24415.3;prot=eq;transcript=eq | + | contig_24415 | No | |
| CR12G03730 | cre | name=estExt_fgenesh1_pg.C_110042;pid=31124;prot=eq;tid=31124;transcript=eq | + | chromosome_12 | No | |
| FV2G34060 | fve | DPH4 homolog (probable) | transcript=eq;prot=eq;pid=gene09078 | + | LG2 | No |
| GM00G00795 | gma | 509 | pid=16257804;transcript=eq;prot=eq;name=Glyma0509s00200.1 | + | scaffold_509 | No |
| GM11G10890 | gma | 11 | pid=16283417;transcript=eq;prot=eq;name=Glyma11g10890.1 | - | Gm11 | No |
| GM12G17550 | gma | 12 | pid=16287776;transcript=eq;prot=eq;name=Glyma12g17550.1 | - | Gm12 | No |
| GM14G08980 | gma | 14 | pid=16294895;transcript=eq;prot=eq;name=Glyma14g08980.1 | - | Gm14 | No |
| GM17G36190 | gma | 17 | pid=16307216;transcript=eq;prot=eq;name=Glyma17g36190.1 | + | Gm17 | No |
| LJ0G028500 | lja | prot=eq;transcript=eq;scaffold=LjSGA_013759;name=LjSGA_013759.1 | - | LjSGA_013759 | No | |
| LJ0G103210 | lja | partial;prot=eq;transcript=eq;scaffold=LjSGA_033028;name=LjSGA_033028.1 | + | LjSGA_033028 | No | |
| MD00G248290 | mdo | transcript=eq;prot=eq;pid=MDP0000138742;tid=MDP0000138742;contig=MDC010692.100 | - | MDC010692.100 | No | |
| MD00G248300 | mdo | transcript=eq;prot=eq;pid=MDP0000138743;tid=MDP0000138743;contig=MDC010692.100 | - | MDC010692.100 | No | |
| MD00G310610 | mdo | transcript=eq;prot=eq;pid=MDP0000201162;tid=MDP0000201162;contig=MDC013190.563 | + | MDC013190.563 | No | |
| MD00G311260 | mdo | transcript=eq;prot=eq;pid=MDP0000199228;tid=MDP0000199228;contig=MDC013218.655 | + | MDC013218.655 | No | |
| ME03104G00250 | mes | PACid=17987921;RNAname=cassava4.1_019107m;GeneName=cassava4.1_019107m.g;transcript=eq;prot=eq | - | scaffold03104 | No |