Gene family  

Sub-families
ORTHO014265 (12 genes in 11 species)
ORTHO052518 (2 genes in 1 species)
ORTHO055910 (2 genes in 1 species)
View all sub-families (3)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (5 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (3 genes)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (3 genes)
tca
Theobroma cacao (2 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (3 genes)



The gene family HOM002846 has 45 genes in 22 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 45 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G32430 aly name=fgenesh1_pm.C_scaffold_6002408;pid=327188;prot=eq;tid=327188 - scaffold_6 No
AT4G10130 ath DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Zinc finger, DPH-type (InterPro:IPR007872); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G13310.1); Has 18672 Blast hits to 18671 proteins in 2948 species: Archae - 158; Bacteria - 7534; Metazoa - 3304; Fungi - 1856; Plants - 1763; Viruses - 10; Other Eukaryotes - 4047 (source: NCBI BLink).;DNAJ heat shock N-terminal domain-containing protein transcript=eq;prot=eq; - 4 No
BD3G38110 bdi pid=Bradi3g38110.1;tid=Bradi3g38110.1;GeneName=Bradi3g38110;transcript=eq;prot=eq - Bd3 No
BD3G58160 bdi pid=Bradi3g58160.1;tid=Bradi3g58160.1;GeneName=Bradi3g58160;transcript=eq;prot=eq + Bd3 No
CP24415G00020 cpa name=evm.TU.contig_24415.2;pid=evm.TU.contig_24415.2;prot=eq;transcript=eq - contig_24415 No
CP24415G00030 cpa name=evm.TU.contig_24415.3;pid=evm.TU.contig_24415.3;prot=eq;transcript=eq + contig_24415 No
CR12G03730 cre name=estExt_fgenesh1_pg.C_110042;pid=31124;prot=eq;tid=31124;transcript=eq + chromosome_12 No
FV2G34060 fve DPH4 homolog (probable) transcript=eq;prot=eq;pid=gene09078 + LG2 No
GM00G00795 gma 509 pid=16257804;transcript=eq;prot=eq;name=Glyma0509s00200.1 + scaffold_509 No
GM11G10890 gma 11 pid=16283417;transcript=eq;prot=eq;name=Glyma11g10890.1 - Gm11 No
GM12G17550 gma 12 pid=16287776;transcript=eq;prot=eq;name=Glyma12g17550.1 - Gm12 No
GM14G08980 gma 14 pid=16294895;transcript=eq;prot=eq;name=Glyma14g08980.1 - Gm14 No
GM17G36190 gma 17 pid=16307216;transcript=eq;prot=eq;name=Glyma17g36190.1 + Gm17 No
LJ0G028500 lja prot=eq;transcript=eq;scaffold=LjSGA_013759;name=LjSGA_013759.1 - LjSGA_013759 No
LJ0G103210 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_033028;name=LjSGA_033028.1 + LjSGA_033028 No
MD00G248290 mdo transcript=eq;prot=eq;pid=MDP0000138742;tid=MDP0000138742;contig=MDC010692.100 - MDC010692.100 No
MD00G248300 mdo transcript=eq;prot=eq;pid=MDP0000138743;tid=MDP0000138743;contig=MDC010692.100 - MDC010692.100 No
MD00G310610 mdo transcript=eq;prot=eq;pid=MDP0000201162;tid=MDP0000201162;contig=MDC013190.563 + MDC013190.563 No
MD00G311260 mdo transcript=eq;prot=eq;pid=MDP0000199228;tid=MDP0000199228;contig=MDC013218.655 + MDC013218.655 No
ME03104G00250 mes PACid=17987921;RNAname=cassava4.1_019107m;GeneName=cassava4.1_019107m.g;transcript=eq;prot=eq - scaffold03104 No
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