Gene family  

Sub-families
ORTHO010418 (19 genes in 17 species)
ORTHO022442 (5 genes in 5 species)
ORTHO029059 (4 genes in 3 species)
View all sub-families (7)
 
Keywords


Overview of gene family content




ath
Arabidopsis thaliana (4 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (4 genes)
osa
Oryza sativa ssp. japonica (3 genes)
osaindica
Oryza sativa ssp. indica (3 genes)
ptr
Populus trichocarpa (5 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (3 genes)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (5 genes)



The gene family HOM002837 has 45 genes in 17 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 45 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AT3G02640 ath unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16250.1); Has 96 Blast hits to 96 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). transcript=eq;prot=eq; - 3 No
AT5G16250 ath unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). transcript=eq;prot=eq; - 5 No
AT5G36710 ath unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). transcript=eq;prot=eq; - 5 No
AT5G36800 ath unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). transcript=eq;prot=eq; - 5 No
BD2G57580 bdi pid=Bradi2g57580.1;tid=Bradi2g57580.1;GeneName=Bradi2g57580;transcript=eq;prot=eq - Bd2 No
BD5G14540 bdi pid=Bradi5g14540.1;tid=Bradi5g14540.1;GeneName=Bradi5g14540;transcript=eq;prot=eq - Bd5 No
CP00144G00130 cpa name=evm.TU.supercontig_144.13;pid=evm.TU.supercontig_144.13;prot=eq;transcript=eq - supercontig_144 No
FV6G00270 fve 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH) (probable) transcript=eq;prot=eq;pid=gene21538 - LG6 No
GM09G38320 gma 09 pid=16277619;transcript=eq;prot=eq;name=Glyma09g38320.1 + Gm09 No
GM18G48030 gma 18 pid=16310791;transcript=eq;prot=eq;name=Glyma18g48030.1 + Gm18 No
LJ0G129950 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_040710;name=LjSGA_040710.1 + LjSGA_040710 No
MD04G020190 mdo transcript=eq;prot=eq;pid=MDP0000257355;tid=MDP0000257355;contig=MDC004190.269 - 4 No
MD12G018580 mdo transcript=eq;prot=eq;pid=MDP0000285738;tid=MDP0000285738;contig=MDC009859.246 - 12 No
MD12G025490 mdo transcript=eq;prot=eq;pid=MDP0000869126;tid=MDP0000869126;contig=MDC023815.55 - 12 No
ME01098G00040 mes PACid=17963479;RNAname=cassava4.1_017127m;GeneName=cassava4.1_017127m.g;transcript=eq;prot=eq + scaffold01098 No
ME08884G00030 mes PACid=17991285;RNAname=cassava4.1_017075m;GeneName=cassava4.1_017075m.g;transcript=eq;prot=eq - scaffold08884 No
ME12711G00080 mes PACid=17979973;RNAname=cassava4.1_017059m;GeneName=cassava4.1_017059m.g;transcript=eq;prot=eq + scaffold12711 No
MT5G028120 mtr Os05g0235100 protein (Fragment) (AHRD V1 ***- C7J2X9_ORYSJ) transcript=eq;prot=eq;pid=Medtr5g028120.1; + 5 Yes
MT7G080550 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr7g080550.1; - 7 No
MT8G081530 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr8g081530.1; + 8 No
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