Gene family  

Sub-families
No subfamilies present
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (4 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (2 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (3 genes)
tca
Theobroma cacao (2 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (4 genes)



The gene family HOM002816 has 46 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 46 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G09570 aly name=fgenesh2_kg.6__948__AT5G09900.1;pid=487814;prot=eq;tid=487814 - scaffold_6 No
AL8G31510 aly name=fgenesh2_kg.8__2507__AT5G64760.1;pid=496691;prot=eq;tid=496691 - scaffold_8 No
AT5G09900 ath Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous gene RPN5b but also appears to exert independent effects.;26S proteasome regulatory subunit, putative (RPN5) transcript=eq;prot=eq; - 5 No
AT5G64760 ath Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous genes RPN5a.;regulatory particle non-ATPase subunit 5B transcript=eq;prot=eq; - 5 No
BD1G01560 bdi 26S, subfamily 19S pid=Bradi1g01560.1;tid=Bradi1g01560.1;GeneName=Bradi1g01560;Name=BdRPN5b;transcript=eq;prot=eq + Bd1 No
BD1G17990 bdi 26S, subfamily 19S pid=Bradi1g17990.1;tid=Bradi1g17990.1;GeneName=Bradi1g17990;Name=BdRPN5a;transcript=eq;prot=eq - Bd1 No
CP00072G00450 cpa name=evm.TU.supercontig_72.45;pid=evm.TU.supercontig_72.45;prot=eq;transcript=eq - supercontig_72 No
CR75G00030 cre name=au.g14615_t1;pid=296996;prot=eq;tid=297003;transcript=eq - scaffold_75 No
FV1G19330 fve 26S proteasome non-ATPase regulatory subunit 12 (probable) transcript=eq;prot=eq;pid=gene21092 - LG1 No
FV5G26480 fve 26S proteasome non-ATPase regulatory subunit 12 (probable) transcript=eq;prot=eq;pid=gene29075 - LG5 No
GM04G39520 gma 04 pid=16257287;transcript=eq;prot=eq;name=Glyma04g39520.1 - Gm04 No
GM05G32030 gma 05 pid=16260374;transcript=eq;prot=eq;name=Glyma05g32030.1 + Gm05 No
GM06G15330 gma 06 pid=16263042;transcript=eq;prot=eq;name=Glyma06g15330.1 + Gm06 No
GM08G15340 gma 08 pid=16271253;transcript=eq;prot=eq;name=Glyma08g15340.1 + Gm08 No
LJ0G447350 lja partial;prot=eq;transcript=eq;scaffold=LjT03L06;name=LjT03L06.70.nd - chr0 No
LJ0G447370 lja partial;prot=eq;transcript=eq;scaffold=LjT03L06;name=LjT03L06.90.nd + chr0 No
MD00G034580 mdo transcript=eq;prot=eq;pid=MDP0000165233;tid=MDP0000165233;contig=MDC001456.304 - MDC001456.304 No
MD00G103420 mdo transcript=eq;prot=eq;pid=MDP0000169508;tid=MDP0000169508;contig=MDC004410.713 - MDC004410.713 No
MD10G006600 mdo transcript=eq;prot=eq;pid=MDP0000219591;tid=MDP0000219591;contig=MDC020042.329 + 10 No
MD11G021890 mdo transcript=eq;prot=eq;pid=MDP0000442374;tid=MDP0000442374;contig=MDC020293.107 - 11 No
<< previous
1 | 2 | 3 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier