Gene family  

Sub-families
ORTHO004727 (27 genes in 22 species)
ORTHO027094 (4 genes in 3 species)
ORTHO049497 (2 genes in 2 species)
View all sub-families (7)
 
Keywords


Overview of gene family content




ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (4 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (3 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (4 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (6 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (4 genes)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (4 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM002745 has 47 genes in 23 species (4 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 47 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AT4G25120 ath Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase. The Arabidopsis SRS2 is a functional 3’- to 5’-helicase. Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.;P-loop containing nucleoside triphosphate hydrolases superfamily protein transcript=eq;prot=eq; + 4 No
BD1G27110 bdi ATP-dependent DNA helicase activity (Blast2GO) pid=Bradi1g27110.1;tid=Bradi1g27110.1;GeneName=Bradi1g27110;transcript=eq;prot=eq + Bd1 No
CP00013G02200 cpa name=evm.TU.supercontig_13.220;pid=evm.TU.supercontig_13.220;prot=eq;transcript=eq + supercontig_13 No
CP00013G02210 cpa name=evm.TU.supercontig_13.221;pid=evm.TU.supercontig_13.221;prot=eq;transcript=eq + supercontig_13 No
CR07G00030 cre name=pasa_Sanger_mRNA29889;pid=392343;prot=eq;tid=420383;transcript=eq - chromosome_7 No
CR07G00040 cre name=au.g13681_t1;pid=296009;prot=eq;tid=296016;transcript=eq - chromosome_7 No
CR07G00390 cre name=OVA_Chlre2_kg.scaffold_6000167;pid=206354;prot=eq;tid=206359;transcript=eq + chromosome_7 No
CR07G06530 cre name=fgenesh2_pg.C_scaffold_16000088;pid=171212;prot=eq;tid=171212;transcript=eq + chromosome_7 No
FV7G32030 fve ATP-dependent DNA helicase pcrA (probable) transcript=eq;prot=eq;pid=gene21064 - LG7 No
GM10G09650 gma 10 pid=16279088;transcript=eq;prot=eq;name=Glyma10g09650.1 - Gm10 No
GM10G14700 gma 10 pid=16279446;transcript=eq;prot=eq;name=Glyma10g14700.1 - Gm10 No
GM20G34060 gma 20 pid=16317789;transcript=eq;prot=eq;name=Glyma20g34060.1 + Gm20 No
MD15G019190 mdo transcript=eq;prot=eq;pid=MDP0000270324;tid=MDP0000270324;contig=MDC002004.448 - 15 Yes
ME06701G00060 mes PACid=17985332;RNAname=cassava4.1_032015m;GeneName=cassava4.1_032015m.g;transcript=eq;prot=eq + scaffold06701 No
MRCC299_05G02770 mrcc299 name=EuGene.0500010279;pid=58546;prot=eq;tid=58546;transcript=eq + Chr_05 No
MT1G072800 mtr ATP-dependent DNA helicase pcrA (AHRD V1 *-*- Q8NVT1); contains Interpro domain(s) IPR000212 DNA helicase, UvrD/REP type transcript=eq;prot=eq;pid=Medtr1g072800.1; + 1 No
MT1G072820 mtr ATP-dependent DNA helicase pcrA (AHRD V1 *-*- Q6GFF2); contains Interpro domain(s) IPR000212 DNA helicase, UvrD/REP type transcript=eq;prot=eq;pid=Medtr1g072820.1; + 1 No
MT1G073080 mtr ATP-dependent DNA helicase pcrA (AHRD V1 *-*- Q6GFF2); contains Interpro domain(s) IPR000212 DNA helicase, UvrD/REP type transcript=eq;prot=eq;pid=Medtr1g073080.1; - 1 No
MT1G073100 mtr ATP-dependent DNA helicase pcrA (AHRD V1 *-*- Q8NVT1); contains Interpro domain(s) IPR000212 DNA helicase, UvrD/REP type transcript=eq;prot=eq;pid=Medtr1g073100.1; - 1 No
OL05G02630 olu NULL name=gwEuk.5.47.1,pid=917,prot=eq,tid=917 - Chr_5 No
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