Gene family  

Sub-families
ORTHO002669 (31 genes in 22 species)
ORTHO033097 (3 genes in 1 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (7 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (6 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (4 genes)
zma
Zea mays (2 genes)



The gene family HOM002717 has 47 genes in 22 species (6 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 47 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G17160 aly name=scaffold_201744.1;pid=894670;prot=eq;tid=926183 + scaffold_2 No
AT1G68890 ath Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis.;magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases transcript=eq;prot=eq; + 1 No
BD3G47067 bdi pid=Bradi3g47067.1;tid=Bradi3g47067.1;GeneName=Bradi3g47067;transcript=eq;prot=eq + Bd3 No
BD3G47080 bdi pid=Bradi3g47080.1;tid=Bradi3g47080.1;GeneName=Bradi3g47080;transcript=eq;prot=eq + Bd3 Yes
CP00048G02350 cpa name=evm.TU.supercontig_48.235;pid=evm.TU.supercontig_48.235;prot=eq;transcript=eq + supercontig_48 No
CP00053G00010 cpa name=evm.TU.supercontig_53.1;pid=evm.TU.supercontig_53.1;prot=eq;transcript=eq + supercontig_53 No
CP00062G01710 cpa name=evm.TU.supercontig_62.172;pid=evm.TU.supercontig_62.172;prot=eq;transcript=eq + supercontig_62 Yes
CP00179G00510 cpa name=evm.TU.supercontig_179.52;pid=evm.TU.supercontig_179.52;prot=eq;transcript=eq + supercontig_179 No
CP00570G00040 cpa name=evm.TU.supercontig_570.4;pid=evm.TU.supercontig_570.4;prot=eq;transcript=eq + supercontig_570 No
CP00878G00030 cpa name=evm.TU.supercontig_878.3;pid=evm.TU.supercontig_878.3;prot=eq;transcript=eq + supercontig_878 No
CP02514G00010 cpa name=evm.TU.supercontig_2514.1;pid=evm.TU.supercontig_2514.1;prot=eq;transcript=eq + supercontig_2514 Yes
CR16G02280 cre name=pasa_Sanger_mRNA15232;pid=395684;prot=eq;tid=405561;transcript=eq - chromosome_16 No
FV0G03090 fve 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate synthase (SEPHCHC synthase) (probable) transcript=eq;prot=eq;pid=gene04506 + scf0513158 No
GM00G00545 gma 103 pid=16242848;transcript=eq;prot=eq;name=Glyma0103s00230.1 - scaffold_103 No
GM01G00270 gma 01 pid=16242891;transcript=eq;prot=eq;name=Glyma01g00270.1 - Gm01 No
GM15G43260 gma 15 pid=16300925;transcript=eq;prot=eq;name=Glyma15g43260.1 - Gm15 No
GM15G43300 gma 15 pid=16300927;transcript=eq;prot=eq;name=Glyma15g43300.1 - Gm15 No
GM15G43360 gma 15 pid=16300931;transcript=eq;prot=eq;name=Glyma15g43360.1 - Gm15 No
GM17G38200 gma 17 pid=16307422;transcript=eq;prot=eq;name=Glyma17g38200.1 + Gm17 No
LJ0G093910 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_030500;name=LjSGA_030500.2 + LjSGA_030500 No
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