Gene family  

Sub-families
ORTHO001861 (35 genes in 23 species)
ORTHO031218 (3 genes in 1 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (6 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (7 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM002692 has 47 genes in 23 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 47 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G08250 aly name=Al_scaffold_0398_1;pid=856046;prot=eq;tid=887559 + scaffold_398 No
AL2G14090 aly name=fgenesh2_kg.2__899__AT3G27430.2;pid=475769;prot=eq;tid=475769 - scaffold_2 No
AL2G14130 aly name=Al_scaffold_0002_1271;pid=876677;prot=eq;tid=908190 + scaffold_2 No
AL5G06100 aly name=scaffold_500645.1;pid=904941;prot=eq;tid=936454 - scaffold_5 No
AL5G06570 aly name=scaffold_500692.1;pid=904988;prot=eq;tid=936501 + scaffold_5 No
AL7G37280 aly name=fgenesh2_kg.7__3358__AT5G40580.2;pid=493925;prot=eq;tid=493925 + scaffold_7 No
AT3G27430 ath Encodes 20S proteasome beta subunit PBB1 (PBB1).;N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein transcript=eq;prot=eq; + 3 No
AT5G40580 ath Encodes 20S proteasome beta subunit PBB2 (PBB2).;20S proteasome beta subunit PBB2 transcript=eq;prot=eq; - 5 No
BD2G05660 bdi 26S, subfamily 20S pid=Bradi2g05660.1;tid=Bradi2g05660.1;GeneName=Bradi2g05660;Name=BdPBB2;transcript=eq;prot=eq + Bd2 No
BD2G33390 bdi 26S, subfamily 20S pid=Bradi2g33390.1;tid=Bradi2g33390.1;GeneName=Bradi2g33390;Name=BdPBB1;transcript=eq;prot=eq - Bd2 No
CP00130G00650 cpa name=evm.TU.supercontig_130.65;pid=evm.TU.supercontig_130.65;prot=eq;transcript=eq + supercontig_130 No
CR10G01530 cre name=estExt_fgenesh2_pg.C_80217;pid=186317;prot=eq;tid=186317;transcript=eq + chromosome_10 No
FV0G40230 fve Proteasome subunit beta type-7-B, Precursor (putative) transcript=eq;prot=eq;pid=gene27977 - scf0513124 No
GM02G46860 gma 02 pid=16250445;transcript=eq;prot=eq;name=Glyma02g46860.1 - Gm02 No
GM14G01850 gma 14 pid=16294014;transcript=eq;prot=eq;name=Glyma14g01850.1 + Gm14 No
LJ0G321320 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_112912;name=LjSGA_112912.1 - LjSGA_112912 No
LJ5G020550 lja prot=eq;transcript=eq;scaffold=CM0239;name=chr5.CM0239.570.nd + chr5 No
MD00G200540 mdo transcript=eq;prot=eq;pid=MDP0000186552;tid=MDP0000186552;contig=MDC008621.112 + MDC008621.112 No
MD00G270270 mdo transcript=eq;prot=eq;pid=MDP0000258556;tid=MDP0000258556;contig=MDC011581.442 + MDC011581.442 No
MD00G276160 mdo transcript=eq;prot=eq;pid=MDP0000014145;tid=MDP0000014145;contig=MDC011792.224 - MDC011792.224 No
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