Gene family  

Sub-families
No subfamilies present
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (4 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (3 genes)
fve
Fragaria vesca (3 genes)
gma
Glycine max (1 gene)
lja
Lotus japonicus (5 genes)
mdo
Malus domestica (8 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (4 genes)
sbi
Sorghum bicolor (4 genes)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (4 genes)



The gene family HOM002543 has 50 genes in 18 species (3 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 50 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G35630 aly name=fgenesh2_kg.4__2980__AT2G47430.1;pid=483920;prot=eq;tid=483920 - scaffold_4 No
AL5G19460 aly name=scaffold_502024.1;pid=906320;prot=eq;tid=937833 - scaffold_5 No
AL5G19510 aly name=scaffold_502026.1;pid=906322;prot=eq;tid=937835 - scaffold_5 No
AL6G29150 aly name=fgenesh2_kg.6__2799__AT2G47430.1;pid=489665;prot=eq;tid=489665 - scaffold_6 No
AT2G47430 ath Encodes a putative plasma membrane-bound hybrid histidine kinase and cytokinin sensor that is expressed within the female gametophyte.;Signal transduction histidine kinase transcript=eq;prot=eq; - 2 No
BD0G00300 bdi two-component sensor activity (Blast2GO) pid=Bradi0009s00230.2;tid=Bradi0009s00230.2;GeneName=Bradi0009s00230;transcript=eq;prot=eq + scaffold_9 No
CP00018G00310 cpa name=evm.TU.supercontig_18.31;pid=evm.TU.supercontig_18.31;prot=eq;transcript=eq + supercontig_18 No
CP00096G00380 cpa name=evm.TU.supercontig_96.38;pid=evm.TU.supercontig_96.38;prot=eq;transcript=eq - supercontig_96 No
CP00096G00390 cpa name=evm.TU.supercontig_96.39;pid=evm.TU.supercontig_96.39;prot=eq;transcript=eq - supercontig_96 No
FV2G16060 fve Pentatricopeptide repeat-containing protein At1g71420 (probable) transcript=eq;prot=eq;pid=gene31231 - LG2 No
FV2G46980 fve Hybrid signal transduction histidine kinase J (probable) transcript=eq;prot=eq;pid=gene08468 + LG2 No
FV5G34920 fve Hybrid signal transduction histidine kinase E (probable) transcript=eq;prot=eq;pid=gene02305 - LG5 No
GM03G37760 gma 03 pid=16253689;transcript=eq;prot=eq;name=Glyma03g37760.1 + Gm03 No
LJ0G106030 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_033822;name=LjSGA_033822.1 - LjSGA_033822 No
LJ0G229750 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_075088;name=LjSGA_075088.1 + LjSGA_075088 No
LJ2G035420 lja prot=eq;transcript=eq;scaffold=CM0545;name=chr2.CM0545.200.nd - chr2 No
LJ4G028760 lja partial;prot=eq;transcript=eq;scaffold=CM0046;name=chr4.CM0046.250.nd + chr4 No
LJ5G020340 lja prot=eq;transcript=eq;scaffold=CM0239;name=chr5.CM0239.360.nd - chr5 No
MD00G215990 mdo transcript=eq;prot=eq;pid=MDP0000230940;tid=MDP0000230940;contig=MDC009314.761 + MDC009314.761 Yes
MD00G380020 mdo transcript=eq;prot=eq;pid=MDP0000302833;tid=MDP0000302833;contig=MDC017209.188 - MDC017209.188 No
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