Gene family  

Sub-families
ORTHO001332 (39 genes in 23 species)
ORTHO018672 (7 genes in 1 species)
ORTHO057602 (2 genes in 2 species)
View all sub-families (3)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (3 genes)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (22 genes)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM002526 has 51 genes in 23 species (5 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 51 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G41960 aly name=fgenesh2_kg.1__3926__AT1G48360.2;pid=473972;prot=eq;tid=473972 + scaffold_1 No
AT1G48360 ath zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HIP116, Rad5p N-terminal (InterPro:IPR014905), VRR-NUC (InterPro:IPR014883); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides transcript=eq;prot=eq; + 1 No
BD1G48100 bdi pid=Bradi1g48100.1;tid=Bradi1g48100.1;GeneName=Bradi1g48100;transcript=eq;prot=eq + Bd1 No
BD1G78727 bdi pid=Bradi1g78727.1;tid=Bradi1g78727.1;GeneName=Bradi1g78727;transcript=eq;prot=eq - Bd1 No
CP00008G03000 cpa name=evm.TU.supercontig_8.301;pid=evm.TU.supercontig_8.301;prot=eq;transcript=eq - supercontig_8 No
CR16G02570 cre name=au.g6267_t1;pid=288068;prot=eq;tid=288075;transcript=eq + chromosome_16 No
FV4G08430 fve Coiled-coil domain-containing protein MTMR15 (probable) transcript=eq;prot=eq;pid=gene22271 + LG4 No
GM08G29160 gma 08 pid=16272819;transcript=eq;prot=eq;name=Glyma08g29160.1 + Gm08 No
GM18G52030 gma 18 pid=16311195;transcript=eq;prot=eq;name=Glyma18g52030.1 + Gm18 No
LJ0G072970 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_024846;name=LjSGA_024846.1 - LjSGA_024846 No
MD00G480750 mdo transcript=eq;prot=eq;pid=MDP0000309487;tid=MDP0000309487;contig=MDC022421.62 + MDC022421.62 No
MD09G023580 mdo transcript=eq;prot=eq;pid=MDP0000312054;tid=MDP0000312054;contig=MDC021272.331 + 9 No
ME04209G00480 mes PACid=17993623;RNAname=cassava4.1_009236m;GeneName=cassava4.1_009236m.g;transcript=eq;prot=eq + scaffold04209 No
ME04209G00490 mes PACid=17993633;RNAname=cassava4.1_009313m;GeneName=cassava4.1_009313m.g;transcript=ne;prot=eq + scaffold04209 No
MRCC299_01G01710 mrcc299 name=MSI_PierreAnnot_Cup93;pid=113925;prot=eq;tid=113925;transcript=eq - Chr_01 No
MT7G022220 mtr Coiled-coil domain-containing protein MTMR15 (AHRD V1 ***- Q69ZT1); contains Interpro domain(s) IPR014883 VRR-NUC transcript=eq;prot=eq;pid=Medtr7g022220.1; - 7 No
OS06G07490 osa HIRAN domain containing protein, putative, expressed transcript=eq;prot=eq; - 6 No
OSINDICA_06G07050 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC009626; - Chr06 No
PP00072G00670 ppa NULL name=e_gw1.72.28.1,pid=128855,prot=eq,tid=128855 + scaffold_72 No
PT02G23110 ptr PACid=17331574;name=POPTR_0002s23490;alias=pt019825m,eugene3.00002160; transcript=eq;prot=eq;protein_id=17331574; - scaffold_2 No
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