Gene family  

Sub-families
ORTHO006915 (23 genes in 17 species)
ORTHO013490 (13 genes in 12 species)
ORTHO017127 (8 genes in 7 species)
View all sub-families (4)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (3 genes)
gma
Glycine max (6 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (5 genes)
mes
Manihot esculenta (5 genes)
mtr
Medicago truncatula (3 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (6 genes)
rco
Ricinus communis (4 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (4 genes)
vvi
Vitis vinifera (4 genes)
zma
Zea mays (1 gene)



The gene family HOM002444 has 52 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 52 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G10230 aly name=scaffold_101094.1;pid=888300;prot=eq;tid=919813 + scaffold_1 No
AL1G12230 aly name=fgenesh2_kg.1__1295__AT1G11915.1;pid=471341;prot=eq;tid=471341 + scaffold_1 No
AT1G10380 ath Putative membrane lipoprotein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 280 Blast hits to 279 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Putative membrane lipoprotein transcript=eq;prot=eq; + 1 No
AT1G11915 ath unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 261 Blast hits to 261 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). transcript=eq;prot=eq; + 1 No
CP00005G02860 cpa name=evm.TU.supercontig_5.286;pid=evm.TU.supercontig_5.286;prot=eq;transcript=eq + supercontig_5 No
CP00152G00360 cpa name=evm.TU.supercontig_152.36;pid=evm.TU.supercontig_152.36;prot=eq;transcript=eq + supercontig_152 No
FV0G04070 fve Wall-associated receptor kinase-like 8, Precursor (probable) transcript=eq;prot=eq;pid=gene04602 - scf0513158 No
FV3G01390 fve Wall-associated receptor kinase 2, Precursor (probable) transcript=eq;prot=eq;pid=gene19479 + LG3 No
FV4G22910 fve Wall-associated receptor kinase-like 20, Precursor (probable) transcript=eq;prot=eq;pid=gene00758 - LG4 No
GM01G04670 gma 01 pid=16243415;transcript=eq;prot=eq;name=Glyma01g04670.1 - Gm01 No
GM02G02890 gma 02 pid=16246782;transcript=eq;prot=eq;name=Glyma02g02890.1 + Gm02 No
GM05G31090 gma 05 pid=16260252;transcript=eq;prot=eq;name=Glyma05g31090.1 + Gm05 No
GM07G39260 gma 07 pid=16269259;transcript=eq;prot=eq;name=Glyma07g39260.1 + Gm07 No
GM15G11690 gma 15 pid=16298459;transcript=eq;prot=eq;name=Glyma15g11690.1 + Gm15 No
GM17G01480 gma 17 pid=16304043;transcript=eq;prot=eq;name=Glyma17g01480.1 - Gm17 No
LJ0G157770 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_049490;name=LjSGA_049490.1 + LjSGA_049490 No
LJ0G182260 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_057631;name=LjSGA_057631.1 + LjSGA_057631 No
MD00G234200 mdo transcript=eq;prot=eq;pid=MDP0000935651;tid=MDP0000935651;contig=MDC010173.125 - MDC010173.125 No
MD00G412020 mdo transcript=eq;prot=eq;pid=MDP0000308304;tid=MDP0000308304;contig=MDC018761.194 + MDC018761.194 No
MD00G430390 mdo transcript=eq;prot=eq;pid=MDP0000332261;tid=MDP0000332261;contig=MDC019656.167 + MDC019656.167 No
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