Gene family  

Sub-families
ORTHO002492 (32 genes in 23 species)
ORTHO055641 (2 genes in 1 species)
ORTHO056134 (2 genes in 1 species)
View all sub-families (5)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (9 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (4 genes)
olu
Ostreococcus lucimarinus (3 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (2 genes)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM002397 has 53 genes in 24 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 53 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL5G02730 aly name=scaffold_500284.1;pid=904580;prot=eq;tid=936093 + scaffold_5 No
AT2G03120 ath homologous to Signal Peptide Peptidases (SPP), required for pollen development and pollen germination. No homozygotes could be recovered from a T-DNA insertion mutant.;signal peptide peptidase transcript=eq;prot=eq; + 2 No
BD1G78070 bdi aspartic endopeptidase activity, intramembrane cleaving (Blast2GO) pid=Bradi1g78070.1;tid=Bradi1g78070.1;GeneName=Bradi1g78070;transcript=eq;prot=eq - Bd1 No
BD3G01610 bdi aspartic endopeptidase activity, intramembrane cleaving (Blast2GO) pid=Bradi3g01610.2;tid=Bradi3g01610.2;GeneName=Bradi3g01610;transcript=eq;prot=eq + Bd3 No
CP00084G00010 cpa name=evm.TU.supercontig_84.1;pid=evm.TU.supercontig_84.1;prot=eq;transcript=eq - supercontig_84 No
CP45617G00010 cpa name=evm.TU.contig_45617.1;pid=evm.TU.contig_45617.1;prot=eq;transcript=eq + contig_45617 No
CR07G04210 cre name=OVA_estExt_GenewiseW_1.C_100079;pid=206029;prot=eq;tid=206034;transcript=eq - chromosome_7 No
CR14G01920 cre name=estExt_fgenesh2_pg.C_10854;pid=190196;prot=eq;tid=190196;transcript=eq - chromosome_14 No
FV2G35740 fve Minor histocompatibility antigen H13 (IMP-1) (probable) transcript=eq;prot=eq;pid=gene08790 - LG2 No
GM04G08510 gma 04 pid=16255312;transcript=eq;prot=eq;name=Glyma04g08510.1 + Gm04 No
GM06G08620 gma 06 pid=16262199;transcript=eq;prot=eq;name=Glyma06g08620.1 + Gm06 No
GM14G21190 gma 14 pid=16295757;transcript=eq;prot=eq;name=Glyma14g21190.1 + Gm14 No
GM20G16020 gma 20 pid=16315991;transcript=eq;prot=eq;name=Glyma20g16020.1 - Gm20 No
LJ0G186560 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_059233;name=LjSGA_059233.1 - LjSGA_059233 No
MD00G195120 mdo transcript=eq;prot=eq;pid=MDP0000124168;tid=MDP0000124168;contig=MDC008390.192 + MDC008390.192 No
MD00G259370 mdo transcript=eq;prot=eq;pid=MDP0000126070;tid=MDP0000126070;contig=MDC011119.294 - MDC011119.294 No
MD00G259430 mdo transcript=eq;prot=eq;pid=MDP0000186653;tid=MDP0000186653;contig=MDC011119.325 + MDC011119.325 No
MD00G298050 mdo transcript=eq;prot=eq;pid=MDP0000197449;tid=MDP0000197449;contig=MDC012696.228 - MDC012696.228 No
MD00G382270 mdo transcript=eq;prot=eq;pid=MDP0000214920;tid=MDP0000214920;contig=MDC017317.303 + MDC017317.303 No
MD00G382280 mdo transcript=eq;prot=eq;pid=MDP0000261590;tid=MDP0000261590;contig=MDC017317.306 + MDC017317.306 No
<< previous
1 | 2 | 3 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier